RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 ZNF568Q3ZCX4 644 aa14.34□□□□□ -0.11
UBE2D3-210ENST00000453744 SPDYAQ5MJ70 313 aa14.34□□□□□ -0.11
UBE2D3-210ENST00000453744 LRRC71Q8N4P6 559 aa14.34□□□□□ -0.11
UBE2D3-210ENST00000453744 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
UBE2D3-210ENST00000453744 SHKBP1Q8TBC3 707 aa14.34□□□□□ -0.11
UBE2D3-210ENST00000453744 ZSCAN18Q8TBC5 510 aaPredicted RBP14.34□□□□□ -0.11
UBE2D3-210ENST00000453744 SUDS3Q9H7L9 328 aaPredicted RBP14.34□□□□□ -0.11
UBE2D3-210ENST00000453744 APOC4-APOC2K7ER74 178 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 APOC2P02655 101 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 F7P08709 466 aaPredicted RBP14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 MX2P20592 715 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 GARSP41250 739 aaKnown RBP14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 INHBEP58166 350 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 PGM5Q15124 567 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 GEN1Q17RS7 908 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 PTPN20Q4JDL3 420 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 TNS4Q8IZW8 715 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 FAM49BQ9NUQ9 324 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 BCAP29Q9UHQ4 241 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 PTPRJQ12913 1337 aa14.33□□□□□ -0.11
UBE2D3-210ENST00000453744 TGDSO95455 350 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 APOEP02649 317 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 C4BPAP04003 597 aaKnown RBP14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 HMGCRP04035 888 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 ALDH1A3P47895 512 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 SLC18A1P54219 525 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 ACTR2P61160 394 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 IL31Q6EBC2 164 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 LAYNQ6UX15 382 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 RELL1Q8IUW5 271 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 CCDC60Q8IWA6 550 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 UNC5BQ8IZJ1 945 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 SLC35B2Q8TB61 432 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 RXFP2Q8WXD0 754 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 CDRT15Q96T59 188 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 CGRRF1Q99675 332 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 IDI2Q9BXS1 227 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 KCNK13Q9HB14 408 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 C20orf96Q9NUD7 363 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 ZNF536O15090 1300 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 ATP9BO43861 1147 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 VNN1O95497 513 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 SERPINA6P08185 405 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 RALBP11234 206 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 CHRNA5P30532 468 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 SDC4P31431 198 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 CCDC14Q49A88 953 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 TFAP2BQ92481 460 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 NUF2Q9BZD4 464 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 SEMA6AQ9H2E6 1030 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 ZNF302Q9NR11 478 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 LZTS1Q9Y250 596 aa14.33□□□□□ -0.12
UBE2D3-210ENST00000453744 IRF6O14896 467 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 ZNF862O60290 1169 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 ENTPD3O75355 529 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 ACBD5Q5T8D3 534 aaPredicted RBP14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 ACAD11Q709F0 780 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 LRRC43Q8N309 656 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 DRAXINQ8NBI3 349 aaPredicted RBP14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 MARK4Q96L34 752 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 OCEL1Q9H607 264 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 TLE6Q9H808 572 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 EURLQ9NYK6 297 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 WDR27A2RRH5 827 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 ITM2AO43736 263 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 FGFR3P22607 806 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 GMPRP36959 345 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 CAP2P40123 477 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 SH3PXD2AQ5TCZ1 1133 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 CHSY1Q86X52 802 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 BPGMP07738 259 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 CSH1P0DML2 217 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 CSH2P0DML3 217 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 HDAC4P56524 1084 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 XKR3Q5GH77 459 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 LRRC38Q5VT99 294 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 ADAM32Q8TC27 787 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 DCUN1D5Q9BTE7 237 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 DHX15O43143 795 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 TPP2P29144 1249 aaPredicted RBP14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 GLRBP48167 497 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 ADARP55265 1226 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 PPIDQ08752 370 aaKnown RBP14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 CRY2Q49AN0 593 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 SNX32Q86XE0 403 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 ATG4CQ96DT6 458 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 STRA6Q9BX79 667 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 PRM3Q9NNZ6 103 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 THEGQ9P2T0 379 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 EPS15L1Q9UBC2 864 aa14.32□□□□□ -0.12
UBE2D3-210ENST00000453744 ANKRD36CQ5JPF3 1778 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 ITGB4P16144 1822 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 CNTNAP2Q9UHC6 1331 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 TBCCQ15814 346 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 ZC3H12AQ5D1E8 599 aaKnown RBP14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 PPM1JQ5JR12 505 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 NRBP2Q9NSY0 501 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 HESX1Q9UBX0 185 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 TPP1O14773 563 aa14.31□□□□□ -0.12
UBE2D3-210ENST00000453744 SIN3BO75182 1162 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms