RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ISM2Q6H9L7 571 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 Q6ZNB5 142 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 RASSF3Q86WH2 238 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 TMEM25Q86YD3 366 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 PHTF2Q8N3S3 785 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 FAM160A2Q8N612 972 aaPredicted RBP16.83■□□□□ 0.28
SGCE-208ENST00000450385 MLKLQ8NB16 471 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 TSTD1Q8NFU3 115 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 LMO3Q8TAP4 145 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 SRRTQ9BXP5 876 aaKnown RBP16.83■□□□□ 0.28
SGCE-208ENST00000450385 IRX2Q9BZI1 471 aaPredicted RBP16.83■□□□□ 0.28
SGCE-208ENST00000450385 NMUR1Q9HB89 426 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 LRRC4Q9HBW1 653 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 POLMQ9NP87 494 aaPredicted RBP16.83■□□□□ 0.28
SGCE-208ENST00000450385 CNGB3Q9NQW8 809 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 TSPAN16Q9UKR8 245 aa16.83■□□□□ 0.28
SGCE-208ENST00000450385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.83■□□□□ 0.28
SGCE-208ENST00000450385 TBC1D3BA6NDS4 549 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 TULP3O75386 442 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 AFPP02771 609 aaKnown RBP16.82■□□□□ 0.28
SGCE-208ENST00000450385 SLC6A11P48066 632 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 TKTL1P51854 596 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 ZNF132P52740 706 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 ZNF445P59923 1031 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 ELF2Q15723 593 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 ANO4Q32M45 955 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 PKDCCQ504Y2 493 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 C2orf27AQ580R0 203 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 SPDYCQ5MJ68 293 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 NAIF1Q69YI7 327 aaPredicted RBP16.82■□□□□ 0.28
SGCE-208ENST00000450385 TTC30AQ86WT1 665 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 PPM1KQ8N3J5 372 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 TERB1Q8NA31 727 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 IRGQQ8WZA9 623 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 CNOT6LQ96LI5 555 aaKnown RBP16.82■□□□□ 0.28
SGCE-208ENST00000450385 HSFY1Q96LI6 401 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
SGCE-208ENST00000450385 FBXO10Q9UK96 956 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 CNTN6Q9UQ52 1028 aa16.82■□□□□ 0.28
SGCE-208ENST00000450385 CACNA1AO00555 2505 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 SDK1Q7Z5N4 2213 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 O00370 1275 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 STC2O76061 302 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 LATS1O95835 1130 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 CD19P15391 556 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 YWHAGP61981 247 aaKnown RBP eCLIP16.81■□□□□ 0.28
SGCE-208ENST00000450385 PDE4CQ08493 712 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 CT47A1Q5JQC4 288 aaPredicted RBP16.81■□□□□ 0.28
SGCE-208ENST00000450385 TMEM270Q6UE05 265 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 RSRC2Q7L4I2 434 aaKnown RBP16.81■□□□□ 0.28
SGCE-208ENST00000450385 CPXM2Q8N436 756 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 IL17RCQ8NAC3 791 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 SLC35F5Q8WV83 523 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 PLD4Q96BZ4 506 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 RMDN1Q96DB5 314 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 HHIPQ96QV1 700 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 RTKNQ9BST9 563 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 BBS2Q9BXC9 721 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 ABCC13Q9NSE7 274 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 SEMA4GQ9NTN9 838 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 MARCH2Q9P0N8 246 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 USP18Q9UMW8 372 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 CTNND2Q9UQB3 1225 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 HBS1LQ9Y450 684 aaKnown RBP16.81■□□□□ 0.28
SGCE-208ENST00000450385 PCDHB4Q9Y5E5 795 aa16.81■□□□□ 0.28
SGCE-208ENST00000450385 PLXND1Q9Y4D7 1925 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 GTPBP10A4D1E9 387 aaKnown RBP16.8■□□□□ 0.28
SGCE-208ENST00000450385 GFRA2O00451 464 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 ZBTB24O43167 697 aaPredicted RBP16.8■□□□□ 0.28
SGCE-208ENST00000450385 FBXO21O94952 628 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 EPN2O95208 641 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 ZNF806P0C7X5 589 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 IRF1P10914 325 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 TYRP14679 529 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 SPEM2Q0P670 501 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 GOLGA7BQ2TAP0 167 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 GRAMD4Q6IC98 578 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 SDE2Q6IQ49 451 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 SIX6OS1Q8N1H7 587 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 NETO1Q8TDF5 533 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 RNF139Q8WU17 664 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 TRIM62Q9BVG3 475 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 SLC2A11Q9BYW1 496 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 CDV3Q9UKY7 258 aaKnown RBP16.8■□□□□ 0.28
SGCE-208ENST00000450385 SLC27A6Q9Y2P4 619 aa16.8■□□□□ 0.28
SGCE-208ENST00000450385 BIN1O00499 593 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 SART1O43290 800 aaKnown RBP16.79■□□□□ 0.28
SGCE-208ENST00000450385 TIMM44O43615 452 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 CYBBP04839 570 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 CHRM1P11229 460 aaPredicted RBP16.79■□□□□ 0.28
SGCE-208ENST00000450385 NTSR1P30989 418 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 DPP6P42658 865 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 HARS2P49590 506 aaKnown RBP16.79■□□□□ 0.28
SGCE-208ENST00000450385 LIMK1P53667 647 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 RSPO4Q2I0M5 234 aaPredicted RBP16.79■□□□□ 0.28
SGCE-208ENST00000450385 PLK5Q496M5 336 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 CLEC17AQ6ZS10 378 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 DGLUCYQ7Z3D6 616 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 C12orf40Q86WS4 652 aa16.79■□□□□ 0.28
SGCE-208ENST00000450385 FAM217AQ8IXS0 508 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms