RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 THEM5Q8N1Q8 247 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 OTUB2Q96DC9 234 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 SENP8Q96LD8 212 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 ACO2Q99798 780 aaKnown RBP8.45□□□□□ -1.06
LINC01961-201ENST00000449954 KIFC3Q9BVG8 833 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 PLEKHA5Q9HAU0 1116 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 TBC1D14Q9P2M4 693 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 CSMD1Q96PZ7 3565 aa8.45□□□□□ -1.06
LINC01961-201ENST00000449954 POLQO75417 2590 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 A0A1B0GTQ1 180 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 HOXC11O43248 304 aaPredicted RBP8.44□□□□□ -1.06
LINC01961-201ENST00000449954 PRPF40AO75400 957 aaKnown RBP8.44□□□□□ -1.06
LINC01961-201ENST00000449954 IGLV3-19P01714 112 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 PROZP22891 400 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 ELAVL4P26378 380 aaKnown RBP8.44□□□□□ -1.06
LINC01961-201ENST00000449954 CTSKP43235 329 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 ZNF132P52740 706 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 LILRA4P59901 499 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 GABREP78334 506 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 IL9RQ01113 521 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 GRIN1Q05586 938 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 STARD3Q14849 445 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 NFE2Q16621 373 aaPredicted RBP8.44□□□□□ -1.06
LINC01961-201ENST00000449954 SLC10A6Q3KNW5 377 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 SGO2Q562F6 1265 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 EGFLAMQ63HQ2 1017 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 IGF2-ASQ6U949 168 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 MPZL3Q6UWV2 235 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 METTL23Q86XA0 190 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 MIB1Q86YT6 1006 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 SMC5Q8IY18 1101 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 LEO1Q8WVC0 666 aaPredicted RBP8.44□□□□□ -1.06
LINC01961-201ENST00000449954 SNX19Q92543 992 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 GTPBP3Q969Y2 492 aaKnown RBP8.44□□□□□ -1.06
LINC01961-201ENST00000449954 ZNF837Q96EG3 531 aaPredicted RBP8.44□□□□□ -1.06
LINC01961-201ENST00000449954 TSPAN18Q96SJ8 248 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 TCHPQ9BT92 498 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 NUP58Q9BVL2 599 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 ETNK1Q9HBU6 452 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 TM9SF3Q9HD45 589 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 ABCB6Q9NP58 842 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 ITM2CQ9NQX7 267 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 PLEKHB1Q9UF11 243 aaPredicted RBP8.44□□□□□ -1.06
LINC01961-201ENST00000449954 NAP1L2Q9ULW6 460 aaPredicted RBP8.44□□□□□ -1.06
LINC01961-201ENST00000449954 ANAPC1Q9H1A4 1944 aa8.44□□□□□ -1.06
LINC01961-201ENST00000449954 ICE1Q9Y2F5 2266 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 NBASA2RRP1 2371 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 CBX4O00257 560 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 CCNT1O60563 726 aaKnown RBP8.43□□□□□ -1.06
LINC01961-201ENST00000449954 PPFIA2O75334 1257 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 TULP3O75386 442 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 MPOP05164 745 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 ITGAVP06756 1048 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 ITGB6P18564 788 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 CYP11B2P19099 503 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 POU3F2P20265 443 aaPredicted RBP8.43□□□□□ -1.06
LINC01961-201ENST00000449954 ABCB4P21439 1286 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 LSSP48449 732 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 TPMTP51580 245 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 SLC7A9P82251 487 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 ZXDBP98169 803 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 E2F1Q01094 437 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 EXOSC10Q01780 885 aaKnown RBP8.43□□□□□ -1.06
LINC01961-201ENST00000449954 NUCB1Q02818 461 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 NOLC1Q14978 699 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC01961-201ENST00000449954 ZBTB6Q15916 424 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 ARL13BQ3SXY8 428 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 LY6G5CQ5SRR4 150 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 CREB3L3Q68CJ9 461 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 KDM7AQ6ZMT4 941 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 ADAT2Q7Z6V5 191 aaKnown RBP8.43□□□□□ -1.06
LINC01961-201ENST00000449954 STKLD1Q8NE28 680 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 LRRC15Q8TF66 581 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 KIFAP3Q92845 792 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 VCPIP1Q96JH7 1222 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC01961-201ENST00000449954 SLC6A17Q9H1V8 727 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 POLR1BQ9H9Y6 1135 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 ASCL3Q9NQ33 180 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 HCN2Q9UL51 889 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 HRH3Q9Y5N1 445 aa8.43□□□□□ -1.06
LINC01961-201ENST00000449954 SETD2Q9BYW2 2564 aaPredicted RBP8.42□□□□□ -1.06
LINC01961-201ENST00000449954 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 KCNJ18B7U540 433 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 ABLIM1O14639 778 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 MT-CO3P00414 261 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 ACADMP11310 421 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 HARSP12081 509 aaKnown RBP8.42□□□□□ -1.06
LINC01961-201ENST00000449954 IFNAR1P17181 557 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 CKMT2P17540 419 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 GPR15P49685 360 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 C21orf59P57076 290 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 TSPY1Q01534 308 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 PPP2R3AQ06190 1150 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 SAFBQ15424 915 aaKnown RBP eCLIP8.42□□□□□ -1.06
LINC01961-201ENST00000449954 LINC00303Q3SY05 128 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 FUT11Q495W5 492 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 GRAMD4Q6IC98 578 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 B4GALNT3Q6L9W6 998 aa8.42□□□□□ -1.06
LINC01961-201ENST00000449954 LRRTM3Q86VH5 581 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms