RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 CCDC110Q8TBZ0 833 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 MYCBPQ99417 103 aaPredicted RBP17.57■□□□□ 0.4
TOM1-210ENST00000449058 TLE6Q9H808 572 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.57■□□□□ 0.4
TOM1-210ENST00000449058 DCTN4Q9UJW0 460 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 SLC15A5A6NIM6 579 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 TRIM49D1C9J1S8 452 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 GCATO75600 419 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 MAP3K6O95382 1288 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 SNRPAP09012 282 aaKnown RBP17.57■□□□□ 0.4
TOM1-210ENST00000449058 HOXD8P13378 290 aaPredicted RBP17.57■□□□□ 0.4
TOM1-210ENST00000449058 ELF1P32519 619 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 PPP6R3Q5H9R7 873 aaPredicted RBP17.57■□□□□ 0.4
TOM1-210ENST00000449058 PPM1NQ8N819 430 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 KCNK13Q9HB14 408 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 SNTG2Q9NY99 539 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 GTF2IRD1Q9UHL9 959 aa17.57■□□□□ 0.4
TOM1-210ENST00000449058 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.56■□□□□ 0.4
TOM1-210ENST00000449058 KLF11O14901 512 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 HNRNPCL1O60812 293 aaKnown RBP17.56■□□□□ 0.4
TOM1-210ENST00000449058 KRT37O76014 449 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 SERPINB4P48594 390 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 ZNF534Q76KX8 674 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 SLC26A9Q7LBE3 791 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 ARCQ7LC44 396 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 FAM13CQ8NE31 585 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 GTF3C2Q8WUA4 911 aaPredicted RBP17.56■□□□□ 0.4
TOM1-210ENST00000449058 NSMCE1Q8WV22 266 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 APBB2Q92870 758 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 SRPK1Q96SB4 655 aaKnown RBP17.56■□□□□ 0.4
TOM1-210ENST00000449058 ADAMTS10Q9H324 1103 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 SMYD2Q9NRG4 433 aa17.56■□□□□ 0.4
TOM1-210ENST00000449058 DNAJC6O75061 913 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 TOMM70O94826 608 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 SNAI1O95863 264 aaPredicted RBP17.55■□□□□ 0.4
TOM1-210ENST00000449058 APOEP02649 317 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 BGNP21810 368 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 PTPN4P29074 926 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 SCNN1AP37088 669 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 CCNFP41002 786 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 RPL34P49207 117 aaKnown RBP17.55■□□□□ 0.4
TOM1-210ENST00000449058 SLC10A2Q12908 348 aaPredicted RBP17.55■□□□□ 0.4
TOM1-210ENST00000449058 SNAPC2Q13487 334 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 SOWAHAQ2M3V2 549 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 SLC27A1Q6PCB7 646 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 CDHR3Q6ZTQ4 885 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 ZNF467Q7Z7K2 595 aaPredicted RBP17.55■□□□□ 0.4
TOM1-210ENST00000449058 CTAGE3PQ8IX95 158 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 UPF1Q92900 1129 aaKnown RBP eCLIP17.55■□□□□ 0.47e-7■■■■■ 38.2
TOM1-210ENST00000449058 TTC17Q96AE7 1141 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 LPIN3Q9BQK8 851 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 MKS1Q9NXB0 559 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 MTMR10Q9NXD2 777 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 COPEO14579 308 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 METTL18O95568 372 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 DLDP09622 509 aaKnown RBP17.55■□□□□ 0.4
TOM1-210ENST00000449058 ZFXP17010 805 aaPredicted RBP17.55■□□□□ 0.4
TOM1-210ENST00000449058 TPSB2P20231 275 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 CCNA1P78396 465 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 GBE1Q04446 702 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 TPSAB1Q15661 275 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 KIZQ2M2Z5 673 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 UNC5AQ6ZN44 842 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 APBB1IPQ7Z5R6 666 aaPredicted RBP17.55■□□□□ 0.4
TOM1-210ENST00000449058 LONP2Q86WA8 852 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 BEST2Q8NFU1 509 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 LRRN4Q8WUT4 740 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 C18orf25Q96B23 403 aaPredicted RBP17.55■□□□□ 0.4
TOM1-210ENST00000449058 SIGLEC10Q96LC7 697 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 DPEP3Q9H4B8 488 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 GEMIN8Q9NWZ8 242 aaKnown RBP17.55■□□□□ 0.4
TOM1-210ENST00000449058 SRCAPQ6ZRS2 3230 aa17.55■□□□□ 0.4
TOM1-210ENST00000449058 A0A0G2JND7 137 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 RFPL1O75677 317 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 NR2C2P49116 596 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 CCNG1P51959 295 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 LGSNQ5TDP6 509 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 ALKAL1Q6UXT8 129 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 VPS52Q8N1B4 723 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 OR6B3Q8NGW1 331 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 CLEC4CQ8WTT0 213 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 N4BP2L2Q92802 583 aaPredicted RBP17.54■□□□□ 0.4
TOM1-210ENST00000449058 SKA1Q96BD8 255 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 QKIQ96PU8 341 aaKnown RBP eCLIP17.54■□□□□ 0.4
TOM1-210ENST00000449058 EIF2AQ9BY44 585 aaKnown RBP17.54■□□□□ 0.4
TOM1-210ENST00000449058 DHX35Q9H5Z1 703 aaKnown RBP17.54■□□□□ 0.4
TOM1-210ENST00000449058 HEY2Q9UBP5 337 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 MTO1Q9Y2Z2 717 aaKnown RBP17.54■□□□□ 0.4
TOM1-210ENST00000449058 MMP3P08254 477 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 EPHB2P29323 1055 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 ARFIP2P53365 341 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 BST2Q10589 180 aaKnown RBP17.54■□□□□ 0.4
TOM1-210ENST00000449058 C9orf57Q5W0N0 161 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 ANKRD52Q8NB46 1076 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 EBNA1BP2Q99848 306 aaKnown RBP17.54■□□□□ 0.4
TOM1-210ENST00000449058 RPL26L1Q9UNX3 145 aaKnown RBP17.54■□□□□ 0.4
TOM1-210ENST00000449058 AP4E1Q9UPM8 1137 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 PLLPQ9Y342 182 aa17.54■□□□□ 0.4
TOM1-210ENST00000449058 A6NJR5 290 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms