RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ABHD2P08910 425 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 ATP5DP30049 168 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 L1CAMP32004 1257 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 LILRA4P59901 499 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 TRIM32Q13049 653 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 TAF1CQ15572 869 aaPredicted RBP15.38■□□□□ 0.05
SF1-211ENST00000448404 DCAF4L1Q3SXM0 396 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 FAM47CQ5HY64 1035 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 KCNT2Q6UVM3 1135 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 ARHGEF18Q6ZSZ5 1173 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 DENND5BQ6ZUT9 1274 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 SPATS2Q86XZ4 545 aaKnown RBP15.38■□□□□ 0.05
SF1-211ENST00000448404 ADGRF2Q8IZF7 708 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 FUKQ8N0W3 1084 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 ATP11CQ8NB49 1132 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 TTC13Q8NBP0 860 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 C3orf58Q8NDZ4 430 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 DCAKDQ8WVC6 231 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 GAD1Q99259 594 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 SNX25Q9H3E2 840 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 NRDE2Q9H7Z3 1164 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 ZNF395Q9H8N7 513 aaPredicted RBP15.38■□□□□ 0.05
SF1-211ENST00000448404 ANLNQ9NQW6 1124 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 MIOSQ9NXC5 875 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 AP4E1Q9UPM8 1137 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 NRCAMQ92823 1304 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 COL1A2P08123 1366 aa15.38■□□□□ 0.05
SF1-211ENST00000448404 CASTOR2A6NHX0 329 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 MSH2P43246 934 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 MAP3K7CLP57077 242 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 YWHAZP63104 245 aaKnown RBP15.37■□□□□ 0.05
SF1-211ENST00000448404 IRX4P78413 519 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 RNASELQ05823 741 aaKnown RBP15.37■□□□□ 0.05
SF1-211ENST00000448404 SPARCL1Q14515 664 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 EFHC2Q5JST6 749 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 CES3Q6UWW8 571 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 CDHR3Q6ZTQ4 885 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 GPRIN1Q7Z2K8 1008 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 CAND1Q86VP6 1230 aaKnown RBP15.37■□□□□ 0.05
SF1-211ENST00000448404 C2orf69Q8N8R5 385 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 TMEM237Q96Q45 408 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 LBHD1Q9BQE6 289 aaPredicted RBP15.37■□□□□ 0.05
SF1-211ENST00000448404 PIRO00625 290 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 NRP1O14786 923 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 TYROBPO43914 113 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 KCNJ11Q14654 390 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 MDH1BQ5I0G3 518 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 FAM228AQ86W67 206 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 APPL2Q8NEU8 664 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 MECRQ9BV79 373 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 NMRK2Q9NPI5 230 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 KLC4Q9NSK0 619 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 PHTF1Q9UMS5 762 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 STK38LQ9Y2H1 464 aa15.37■□□□□ 0.05
SF1-211ENST00000448404 ZNF638Q14966 1978 aaKnown RBP15.37■□□□□ 0.05
SF1-211ENST00000448404 FAM72CH0Y354 149 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 I6L893 689 aaPredicted RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 PYGBP11216 843 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 HOXD8P13378 290 aaPredicted RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 FAM72AQ5TYM5 149 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 FAM72DQ6L9T8 149 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 CYB5D1Q6P9G0 228 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 PAQR9Q6ZVX9 377 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 FAM72BQ86X60 149 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 SPNS2Q8IVW8 549 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 MAGEB18Q96M61 343 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 TTC25Q96NG3 672 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 CNTN3Q9P232 1028 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 ZMYND8Q9ULU4 1186 aaPredicted RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 RASSF9O75901 435 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 VAV1P15498 845 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 IFRD2Q12894 506 aaPredicted RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 MAP2K5Q13163 448 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 PLEKHG4Q58EX7 1191 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 HHATQ5VTY9 493 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 ZNF467Q7Z7K2 595 aaPredicted RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 CSPG4P5Q96PW8 444 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 FAM111AQ96PZ2 611 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 NSRP1Q9H0G5 558 aaKnown RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 ACSS3Q9H6R3 686 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 ECT2Q9H8V3 914 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 NPHS2Q9NP85 383 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 UBQLN1Q9UMX0 589 aaKnown RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 MYBPHLA2RUH7 354 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 MBLAC1A4D2B0 266 aaPredicted RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 USP12O75317 370 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 SULT1E1P49888 294 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 ZNF157P51786 506 aaPredicted RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 IL9RQ01113 521 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 PTK7Q13308 1070 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 E2F5Q15329 346 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 LRRC6Q86X45 466 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 ANKRD52Q8NB46 1076 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 B3GALNT2Q8NCR0 500 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 MZB1Q8WU39 189 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 EDEM1Q92611 657 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 N4BP2L2Q92802 583 aaPredicted RBP15.36■□□□□ 0.05
SF1-211ENST00000448404 TTC17Q96AE7 1141 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 TBC1D31Q96DN5 1066 aa15.36■□□□□ 0.05
SF1-211ENST00000448404 PRR11Q96HE9 360 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms