RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 SPAG5Q96R06 1193 aa14.82□□□□□ -0.04
SREBF1-207ENST00000447641 KLF16Q9BXK1 252 aaPredicted RBP14.82□□□□□ -0.04
SREBF1-207ENST00000447641 BRD9Q9H8M2 597 aa14.82□□□□□ -0.04
SREBF1-207ENST00000447641 TBC1D17Q9HA65 648 aa14.82□□□□□ -0.04
SREBF1-207ENST00000447641 THG1LQ9NWX6 298 aaKnown RBP14.82□□□□□ -0.04
SREBF1-207ENST00000447641 NAGPAQ9UK23 515 aa14.82□□□□□ -0.04
SREBF1-207ENST00000447641 CPQQ9Y646 472 aa14.82□□□□□ -0.04
SREBF1-207ENST00000447641 TICRRQ7Z2Z1 1910 aa14.82□□□□□ -0.04
SREBF1-207ENST00000447641 SHISA7A6NL88 538 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 LEFTY2O00292 366 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 GREM1O60565 184 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 DCNP07585 359 aaKnown RBP14.81□□□□□ -0.04
SREBF1-207ENST00000447641 LCP1P13796 627 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 ATP5C1P36542 298 aaKnown RBP14.81□□□□□ -0.04
SREBF1-207ENST00000447641 CDR2Q01850 454 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 PDCLQ13371 301 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 SLC44A4Q53GD3 710 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 BSPRYQ5W0U4 402 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 IRF2BP2Q7Z5L9 587 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 DDX42Q86XP3 938 aaKnown RBP eCLIP14.81□□□□□ -0.04
SREBF1-207ENST00000447641 SCUBE3Q8IX30 993 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 MAML2Q8IZL2 1156 aaPredicted RBP14.81□□□□□ -0.04
SREBF1-207ENST00000447641 SIX6OS1Q8N1H7 587 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 DCLK2Q8N568 766 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 CPXM1Q96SM3 734 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 CDK5RAP1Q96SZ6 601 aaKnown RBP14.81□□□□□ -0.04
SREBF1-207ENST00000447641 DDX23Q9BUQ8 820 aaKnown RBP14.81□□□□□ -0.04
SREBF1-207ENST00000447641 XPO4Q9C0E2 1151 aaKnown RBP14.81□□□□□ -0.04
SREBF1-207ENST00000447641 GKN1Q9NS71 199 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 DNMT3LQ9UJW3 386 aa14.81□□□□□ -0.04
SREBF1-207ENST00000447641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.81□□□□□ -0.042e-8■■■□□ 15.9
SREBF1-207ENST00000447641 F5P12259 2224 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 E2F8A0AVK6 867 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 E5RJQ4 531 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 PAPSS1O43252 624 aaPredicted RBP14.8□□□□□ -0.04
SREBF1-207ENST00000447641 LSM8O95777 96 aaKnown RBP14.8□□□□□ -0.04
SREBF1-207ENST00000447641 FYNP06241 537 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 MMEP08473 750 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 MBL2P11226 248 aaPredicted RBP14.8□□□□□ -0.04
SREBF1-207ENST00000447641 RALAP11233 206 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 STARD6P59095 220 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 MTF1Q14872 753 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 BEND5Q7L4P6 421 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 CACNA2D4Q7Z3S7 1137 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 PASD1Q8IV76 773 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 YAF2Q8IY57 180 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 CLEC4CQ8WTT0 213 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 SLC20A1Q8WUM9 679 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 OSCP1Q8WVF1 389 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 ZFYVE19Q96K21 471 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 PPP1R13BQ96KQ4 1090 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 SYT11Q9BT88 431 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 HPS4Q9NQG7 708 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 AIPL1Q9NZN9 384 aa14.8□□□□□ -0.04
SREBF1-207ENST00000447641 A0A1W2PQJ5 194 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 PIK3R2O00459 728 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 CYP1A1P04798 512 aaPredicted RBP14.79□□□□□ -0.04
SREBF1-207ENST00000447641 SP9P0CG40 484 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 GABRB2P47870 512 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 FMO1Q01740 532 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 PRKCQQ04759 706 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 PDGFRLQ15198 375 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 C10orf120Q5SQS8 335 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 SPECC1LQ69YQ0 1117 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 MSANTD2Q6P1R3 559 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 HTR3DQ70Z44 454 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 DGLUCYQ7Z3D6 616 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 TADA2BQ86TJ2 420 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 TMEM35BQ8NCS4 154 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 C1orf131Q8NDD1 294 aaKnown RBP14.79□□□□□ -0.04
SREBF1-207ENST00000447641 WBP2Q969T9 261 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 NUP58Q9BVL2 599 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 MIS12Q9H081 205 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 LINC00597Q9H2U6 94 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 ARHGEF3Q9NR81 526 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 ST7Q9NRC1 585 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 ABCC13Q9NSE7 274 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 OLA1Q9NTK5 396 aaKnown RBP14.79□□□□□ -0.04
SREBF1-207ENST00000447641 SMPD4Q9NXE4 827 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 DLL3Q9NYJ7 618 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 CFAP97Q9P2B7 532 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 TJP2Q9UDY2 1190 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 NUDT5Q9UKK9 219 aa14.79□□□□□ -0.04
SREBF1-207ENST00000447641 ITIH6Q6UXX5 1313 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 OTOL1A6NHN0 477 aaPredicted RBP14.78□□□□□ -0.04
SREBF1-207ENST00000447641 SART1O43290 800 aaKnown RBP14.78□□□□□ -0.04
SREBF1-207ENST00000447641 LTFP02788 710 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 ERBB2P04626 1255 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 FERP16591 822 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 NOMO3P69849 1222 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 TNK2Q07912 1038 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 MLF2Q15773 248 aaPredicted RBP14.78□□□□□ -0.04
SREBF1-207ENST00000447641 EML3Q32P44 896 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 PTPN20Q4JDL3 420 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 TAF3Q5VWG9 929 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 BTBD8Q5XKL5 378 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 FMNL3Q8IVF7 1028 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 ADGRG2Q8IZP9 1017 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 ZNF687Q8N1G0 1237 aa14.78□□□□□ -0.04
SREBF1-207ENST00000447641 SUMF1Q8NBK3 374 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms