RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 EIF2S1P05198 315 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 UQCRBP14927 111 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 HOXA11P31270 313 aaPredicted RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 PBX2P40425 430 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 NAMPTP43490 491 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 NPTX2P47972 431 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 POLR2FP61218 127 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 ASIC1P78348 528 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 SPARCL1Q14515 664 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 C6orf163Q5TEZ5 329 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 TCERG1LQ5VWI1 586 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 ALKBH5Q6P6C2 394 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 NLRP9Q7RTR0 991 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 PATL1Q86TB9 770 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 PDSS2Q86YH6 399 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 FAM186BQ8IYM0 893 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 NMD3Q96D46 503 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 LRCH3Q96II8 777 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 TTC25Q96NG3 672 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 RBM38Q9H0Z9 239 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 RC3H2Q9HBD1 1191 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 ARHGEF38Q9NXL2 777 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 SENP1Q9P0U3 644 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 WHRNQ9P202 907 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 ARHGAP28Q9P2N2 729 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 SMG5Q9UPR3 1016 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 LRRIQ4A6NIV6 560 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 C9IYK1 514 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 GPR182O15218 404 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 B4GALT5O43286 388 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 TSPAN1O60635 241 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 OPHN1O60890 802 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 ZBED1O96006 694 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 ATF7P17544 494 aaPredicted RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 GRIA2P42262 883 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 HALP42357 657 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 PHKA2P46019 1235 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 CAV1Q03135 178 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 RAPGEF1Q13905 1077 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 FYB2Q5VWT5 728 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 KLHL35Q6PF15 583 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 IRF2BP2Q7Z5L9 587 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 VPS52Q8N1B4 723 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 LSM14AQ8ND56 463 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 DENND1AQ8TEH3 1009 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 SLCO2A1Q92959 643 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 BTBD9Q96Q07 612 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 SLC9A7Q96T83 725 aa13.59□□□□□ -0.23
DDX56-206ENST00000446987 YBX2Q9Y2T7 364 aaKnown RBP13.59□□□□□ -0.23
DDX56-206ENST00000446987 NLRC5Q86WI3 1866 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 MIF4GDA9UHW6 222 aaKnown RBP13.58□□□□□ -0.24
DDX56-206ENST00000446987 EFCAB14O75071 495 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 KRT38O76015 456 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 TTC4O95801 387 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 NAT1P18440 290 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 CHN2P52757 468 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 RABGGTBP53611 331 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 PEX3P56589 373 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 TBL3Q12788 808 aaKnown RBP13.58□□□□□ -0.24
DDX56-206ENST00000446987 TFDP1Q14186 410 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 LONRF1Q17RB8 773 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 NEPROQ6NW34 567 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 SATL1Q86VE3 508 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 RELL1Q8IUW5 271 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 HERC6Q8IVU3 1022 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 ALLCQ8N6M5 410 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.58□□□□□ -0.24
DDX56-206ENST00000446987 BIRC8Q96P09 236 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 ADAM2Q99965 735 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 CCDC77Q9BR77 488 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 FTHL17Q9BXU8 183 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 PBX4Q9BYU1 374 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 CDC42EP4Q9H3Q1 356 aaKnown RBP13.58□□□□□ -0.24
DDX56-206ENST00000446987 FZD8Q9H461 694 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 METTL5Q9NRN9 209 aaKnown RBP13.58□□□□□ -0.24
DDX56-206ENST00000446987 RGS18Q9NS28 235 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 RNF19AQ9NV58 838 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 EURLQ9NYK6 297 aa13.58□□□□□ -0.24
DDX56-206ENST00000446987 FAM32AQ9Y421 112 aaKnown RBP13.58□□□□□ -0.24
DDX56-206ENST00000446987 HBS1LQ9Y450 684 aaKnown RBP13.58□□□□□ -0.24
DDX56-206ENST00000446987 BUD23O43709 281 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 HAUS5O94927 633 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 PDGFRBP09619 1106 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 MYOGP15173 224 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 CREB1P16220 341 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 GALK1P51570 392 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 WDR4P57081 412 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 IRX4P78413 519 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 SMAD3P84022 425 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 FKBP3Q00688 224 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 PTK2Q05397 1052 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 STAT4Q14765 748 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 UBXN11Q5T124 520 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 PACS1Q6VY07 963 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 EPM2AIP1Q7L775 607 aaPredicted RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 OR6Y1Q8NGX8 325 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 DDI1Q8WTU0 396 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 DDX12PQ92771 950 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms