RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	FBXL18	Q96ME1	805 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	ARPC5L	Q9BPX5	153 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	ANKEF1	Q9NU02	776 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	SLC7A8	Q9UHI5	535 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	ZNF711	Q9Y462	761 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	ANKRD12	Q6UB98	2062 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	LAMA2	P24043	3122 aa	Known RBP	13	□□□□□ -0.33
DDR1-238	ENST00000446312	PEX1	O43933	1283 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	ALOX15	P16050	662 aa	Predicted RBP	13	□□□□□ -0.33
DDR1-238	ENST00000446312	KCNA2	P16389	499 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	GLRA4	Q5JXX5	417 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	RABGAP1L	Q5R372	815 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	CMC1	Q7Z7K0	106 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	ZBTB46	Q86UZ6	589 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	VSIG10L	Q86VR7	867 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	SESTD1	Q86VW0	696 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	PHF13	Q86YI8	300 aa	Predicted RBP	13	□□□□□ -0.33
DDR1-238	ENST00000446312	SAMD3	Q8N6K7	520 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	DEPDC1B	Q8WUY9	529 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	RXFP2	Q8WXD0	754 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	VTI1A	Q96AJ9	217 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	CLMN	Q96JQ2	1002 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	WRNIP1	Q96S55	665 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	CLIC5	Q9NZA1	410 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	ARHGAP28	Q9P2N2	729 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	AFG3L2	Q9Y4W6	797 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	SNCAIP	Q9Y6H5	919 aa		13	□□□□□ -0.33
DDR1-238	ENST00000446312	SPECC1L-ADORA2A	F8WAN1	911 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	NPTXR	O95502	500 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	CALB1	P05937	261 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	NFIC	P08651	508 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	MUT	P22033	750 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	PDE1B	Q01064	536 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	C1QBP	Q07021	282 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	TRIP10	Q15642	601 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	CCDC142	Q17RM4	750 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	OLFML2B	Q68BL8	750 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	ADGRD1	Q6QNK2	874 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	ULK2	Q8IYT8	1036 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	ZNF276	Q8N554	614 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	SLC35B2	Q8TB61	432 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	PTCD3	Q96EY7	689 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	SDCBP2	Q9H190	292 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	NDE1	Q9NXR1	346 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	PHF24	Q9UPV7	400 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	SHOC2	Q9UQ13	582 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	CIT	O14578	2027 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	TCEA3	O75764	348 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	TMCC1	O94876	653 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	GART	P22102	1010 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	GSTT1	P30711	240 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	GBE1	Q04446	702 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	KLHL38	Q2WGJ6	581 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	ENOSF1	Q7L5Y1	443 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	KDELC2	Q7Z4H8	507 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	HPS6	Q86YV9	775 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	GALNT4	Q8N4A0	578 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	SPATA6L	Q8N4H0	392 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	CLEC4C	Q8WTT0	213 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	USP13	Q92995	863 aa	Predicted RBP	12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	GCNA	Q96QF7	691 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	DHX35	Q9H5Z1	703 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	C17orf75	Q9HAS0	396 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	ZNF510	Q9Y2H8	683 aa		12.99	□□□□□ -0.33
DDR1-238	ENST00000446312	RNASEH1	O60930	286 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	PDGFRB	P09619	1106 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	ANPEP	P15144	967 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	BCAR1	P56945	870 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	TGFB2	P61812	414 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	ASPH	Q12797	758 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	WASHC2D	Q5SRD0	308 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	C15orf39	Q6ZRI6	1047 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	PYROXD2	Q8N2H3	581 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	CGRRF1	Q99675	332 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	CXCL16	Q9H2A7	254 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	ANKRD31	Q8N7Z5	1873 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	DOCK5	Q9H7D0	1870 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	WDR27	A2RRH5	827 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	AIM2	O14862	343 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	METTL18	O95568	372 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	MT-CO1	P00395	513 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	PEX2	P28328	305 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	SFN	P31947	248 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	MLH1	P40692	756 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	RTP1	P59025	263 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	TMEM132B	Q14DG7	1078 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	TP53INP2	Q8IXH6	220 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	FAM156A	Q8NDB6	213 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	APOPT1	Q96IL0	206 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	NIF3L1	Q9GZT8	377 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	DDX18	Q9NVP1	670 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	SLC24A2	Q9UI40	661 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	PCDHGB4	Q9UN71	923 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	PCDHGB5	Q9Y5G0	923 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	PRPSAP2	O60256	369 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	ABHD2	P08910	425 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	ARSA	P15289	507 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	SERPINB5	P36952	375 aa		12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	SKIV2L2	P42285	1042 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-238	ENST00000446312	CXCL9	Q07325	125 aa		12.98	□□□□□ -0.33

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