RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 GNPTGQ9UJJ9 305 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 GINS2Q9Y248 185 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 TMEM114B3SHH9 223 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 RNASEH1O60930 286 aaKnown RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 PIK3R1P27986 724 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 FRG1Q14331 258 aaKnown RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 SGF29Q96ES7 293 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 APOL4Q9BPW4 351 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 DNAJB4Q9UDY4 337 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 C3orf70A6NLC5 250 aaPredicted RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 CASP4P49662 377 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 ASRGL1Q7L266 308 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 MCOLN2Q8IZK6 566 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 LNX1Q8TBB1 728 aaPredicted RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 ETNPPLQ8TBG4 499 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 MED15Q96RN5 788 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 SEPT9Q9UHD8 586 aaPredicted RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 PLA2G4CQ9UP65 541 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 PLLPQ9Y342 182 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 FSCN2O14926 492 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 MED26O95402 600 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 CREB1P16220 341 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 PRDX6P30041 224 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 TUBA3CQ13748 450 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 KCNT1Q5JUK3 1230 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 HGSNATQ68CP4 663 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 ALLCQ8N6M5 410 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 CACNA2D2Q9NY47 1150 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 ZSCAN5DPP0CG00 497 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 PSMC5P62195 406 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
SMG1-202ENST00000446231 TUBGCP4Q9UGJ1 667 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 NR2E1Q9Y466 385 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 RBP3P10745 1247 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 ZNF667Q5HYK9 610 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 OR6P1Q8NGX9 317 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 NRXN1Q9ULB1 1477 aa8.11□□□□□ -1.11
SMG1-202ENST00000446231 A0A1W2PQ72 361 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 UBASH3BQ8TF42 649 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 HSPBAP1Q96EW2 488 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 DHX35Q9H5Z1 703 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 RUBCNLQ9H714 662 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 MGAT5Q09328 741 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TAGAPQ8N103 731 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 GPBP1L1Q9HC44 474 aaPredicted RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 PPM1HQ9ULR3 514 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TBX20Q9UMR3 447 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 KLHL20Q9Y2M5 609 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TESPA1A2RU30 521 aaPredicted RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 TSC22D2O75157 780 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 HLA-DRAP01903 254 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 NEK3P51956 506 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 LRRC38Q5VT99 294 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 MFSD7Q6UXD7 560 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 S100ZQ8WXG8 99 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 OSBPL10Q9BXB5 764 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 MOV10Q9HCE1 1003 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 LRRC7Q96NW7 1537 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 KATNA1O75449 491 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 FGFR3P22607 806 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 EIF4BP23588 611 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 TKTP29401 623 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 SOX6P35712 828 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 HEATR6Q6AI08 1181 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 RWDD4Q6NW29 188 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 BANPQ8N9N5 519 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 EXOSC4Q9NPD3 245 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 APC2O95996 2303 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TFPTP0C1Z6 253 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 MTMR2Q13614 643 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 RPAP3Q9H6T3 665 aaPredicted RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 COL15A1P39059 1388 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 FAM205AQ6ZU69 1335 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 SNAP91O60641 907 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 CSF1RP07333 972 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 BPGMP07738 259 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 RASA1P20936 1047 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TUBP50607 506 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 MMRN1Q13201 1228 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TOP3AQ13472 1001 aaPredicted RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 TAB1Q15750 504 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 ZNF394Q53GI3 561 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 FAM160B1Q5W0V3 765 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TEX12Q9BXU0 123 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 ITGAVP06756 1048 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 RPA1P27694 616 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 SF3B3Q15393 1217 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 SBK1Q52WX2 424 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TRIQKQ629K1 86 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 VSTM1Q6UX27 236 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 TCAIMQ8N3R3 496 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 HNRNPCL2B2RXH8 293 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 K7ERI5 159 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 CDK9P50750 372 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 PHC1P78364 1004 aa8.1□□□□□ -1.11
SMG1-202ENST00000446231 CAPRIN1Q14444 709 aaKnown RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 OTUD3Q5T2D3 398 aaPredicted RBP8.1□□□□□ -1.11
SMG1-202ENST00000446231 INPP4BO15327 924 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms