RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CSNK1G1Q9HCP0 422 aa15.23■□□□□ 0.03
HMGN1-208ENST00000443046 DMAP1Q9NPF5 467 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-208ENST00000443046 CYLDQ9NQC7 956 aa15.23■□□□□ 0.03
HMGN1-208ENST00000443046 FNDC3AQ9Y2H6 1198 aaKnown RBP15.23■□□□□ 0.03
HMGN1-208ENST00000443046 MYH10P35580 1976 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 METTL12A8MUP2 240 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 TLR5O60602 858 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 CILPO75339 1184 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 TBX18O95935 607 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 ATXN1LP0C7T5 689 aaKnown RBP15.22■□□□□ 0.03
HMGN1-208ENST00000443046 DLATP10515 647 aaKnown RBP15.22■□□□□ 0.03
HMGN1-208ENST00000443046 NCAM1P13591 858 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 ACO1P21399 889 aaKnown RBP15.22■□□□□ 0.03
HMGN1-208ENST00000443046 ATICP31939 592 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 DGKGP49619 791 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 ZNF132P52740 706 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 MYL6P60660 151 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 CYP24A1Q07973 514 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 IL27RAQ6UWB1 636 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 EPM2AIP1Q7L775 607 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-208ENST00000443046 SCUBE3Q8IX30 993 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 FUKQ8N0W3 1084 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 ZCCHC9Q8N567 271 aaKnown RBP15.22■□□□□ 0.03
HMGN1-208ENST00000443046 SETD7Q8WTS6 366 aaKnown RBP15.22■□□□□ 0.03
HMGN1-208ENST00000443046 SMARCD1Q96GM5 515 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 SMOQ99835 787 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 PRDM16Q9HAZ2 1276 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 TM7SF3Q9NS93 570 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 SLC27A6Q9Y2P4 619 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 STON1Q9Y6Q2 735 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 CKAP5Q14008 2032 aa15.22■□□□□ 0.03
HMGN1-208ENST00000443046 ATP8B3O60423 1300 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 BCAT2O15382 392 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-208ENST00000443046 TGFB1I1O43294 461 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 BEST1O76090 585 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 CER1O95813 267 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 TNNI1P19237 187 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 TPMTP51580 245 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 CDH8P55286 799 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 HLA-BQ31612 363 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 DCAF12L1Q5VU92 463 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 KIAA1324Q6UXG2 1013 aaKnown RBP15.21■□□□□ 0.03
HMGN1-208ENST00000443046 Q6ZNB5 142 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 TPGS1Q6ZTW0 290 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 CCDC65Q8IXS2 484 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 ADAM32Q8TC27 787 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 ZNF507Q8TCN5 953 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 HPS3Q969F9 1004 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 CDC6Q99741 560 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 GPR174Q9BXC1 333 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 FBXO44Q9H4M3 255 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 SMYD3Q9H7B4 428 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 OSER1Q9NX31 292 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 THAP10Q9P2Z0 257 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-208ENST00000443046 SMC3Q9UQE7 1217 aa15.21■□□□□ 0.03
HMGN1-208ENST00000443046 MORC2Q9Y6X9 1032 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-208ENST00000443046 TRABD2BA6NFA1 517 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 MEI4A8MW99 385 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 NPC1O15118 1278 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 EIF3DO15371 548 aaKnown RBP eCLIP15.2■□□□□ 0.02
HMGN1-208ENST00000443046 FLRT2O43155 660 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 AP1G2O75843 785 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 C7P10643 843 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 OXTRP30559 389 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 TXLNAP40222 546 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 MATKP42679 507 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 CYP4F3Q08477 520 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 KLHDC10Q6PID8 442 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 STXBP4Q6ZWJ1 553 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 RDH13Q8NBN7 331 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 RBBP8NLQ8NC74 664 aaPredicted RBP15.2■□□□□ 0.02
HMGN1-208ENST00000443046 SYAP1Q96A49 352 aaPredicted RBP15.2■□□□□ 0.02
HMGN1-208ENST00000443046 TNIP3Q96KP6 325 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 PANK2Q9BZ23 570 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 NACA2Q9H009 215 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.2■□□□□ 0.021e-9■■■■■ 62.2
HMGN1-208ENST00000443046 TLR8Q9NR97 1041 aaKnown RBP15.2■□□□□ 0.02
HMGN1-208ENST00000443046 AGPAT3Q9NRZ7 376 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 PPP4R2Q9NY27 417 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 NXF1Q9UBU9 619 aaKnown RBP15.2■□□□□ 0.02
HMGN1-208ENST00000443046 SHROOM3Q8TF72 1996 aa15.2■□□□□ 0.02
HMGN1-208ENST00000443046 PENKP01210 267 aaPredicted RBP15.19■□□□□ 0.02
HMGN1-208ENST00000443046 ATP5C1P36542 298 aaKnown RBP15.19■□□□□ 0.02
HMGN1-208ENST00000443046 STAT6P42226 847 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 IL12RB1P42701 662 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
HMGN1-208ENST00000443046 STARD3Q14849 445 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 SMAD1Q15797 465 aaKnown RBP15.19■□□□□ 0.02
HMGN1-208ENST00000443046 MARCH9Q86YJ5 346 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 CRYBG2Q8N1P7 616 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 GALNT15Q8N3T1 639 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 CCDC127Q96BQ5 260 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 MED10Q9BTT4 135 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 SDCBP2Q9H190 292 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 KRT82Q9NSB4 513 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 LSM7Q9UK45 103 aaKnown RBP15.19■□□□□ 0.02
HMGN1-208ENST00000443046 BTBD3Q9Y2F9 522 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 NUMA1Q14980 2115 aa15.19■□□□□ 0.02
HMGN1-208ENST00000443046 TMEM131Q92545 1883 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms