RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 PYDC1Q8WXC3 89 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 APOPT1Q96IL0 206 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 ANKRD36BP1Q96IX9 119 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 ZNF358Q9NW07 568 aa13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 MAP3K20Q9NYL2 800 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-201ENST00000442218 ITM2AO43736 263 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 PRPSAP2O60256 369 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 PSMG1O95456 288 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 CYP2C8P10632 490 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 ATP6V1C1P21283 382 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 EIF4BP23588 611 aaKnown RBP13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 DRICH1Q6PGQ1 229 aaPredicted RBP13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 RDM1Q8NG50 284 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 SLC44A1Q8WWI5 657 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 DCLRE1BQ9H816 532 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 ARHGEF4Q9NR80 690 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 CNTN6Q9UQ52 1028 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 H0YCG3 227 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 APOC4-APOC2K7ER74 178 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 ATG7O95352 703 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 APOC2P02655 101 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 ZNF286BP0CG31 522 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 GNAT1P11488 350 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 MSX2P35548 267 aaPredicted RBP13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 OAZ1P54368 228 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 BCAR1P56945 870 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 PPM1JQ5JR12 505 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 RALGPS1Q5JS13 557 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 LRRC74BQ6ZQY2 392 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 DENND5BQ6ZUT9 1274 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 USP50Q70EL3 339 aaPredicted RBP13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 PYROXD2Q8N2H3 581 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 GSTCDQ8NEC7 633 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 SPATA33Q96N06 139 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 SPATC1LQ9H0A9 340 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 PLAC1Q9HBJ0 212 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 NRBP2Q9NSY0 501 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 CPSF3Q9UKF6 684 aaKnown RBP13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 LRRC42Q9Y546 428 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 PAPPA2Q9BXP8 1791 aa13.62□□□□□ -0.23
SLC48A1-201ENST00000442218 I3L4J1 428 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 PPEF2O14830 753 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 NDST1P52848 882 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 RTP1P59025 263 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 KLC1Q07866 573 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 LRRC38Q5VT99 294 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 ACOT1Q86TX2 421 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■■■■ 102.3
SLC48A1-201ENST00000442218 ZNF483Q8TF39 744 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 SKA1Q96BD8 255 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 ZNF333Q96JL9 665 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 UNKQ9C0B0 810 aaKnown RBP13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 DHX35Q9H5Z1 703 aaKnown RBP13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 MAN1C1Q9NR34 630 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 BATF3Q9NR55 127 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 TTLL3Q9Y4R7 772 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 HES2Q9Y543 173 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 TEX264Q9Y6I9 313 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 USP12O75317 370 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 AP1G2O75843 785 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 C6orf222P0C671 652 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 C1orf146Q5VVC0 180 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 CDCA2Q69YH5 1023 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 PCGF5Q86SE9 256 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 CAND1Q86VP6 1230 aaKnown RBP13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 TP53INP2Q8IXH6 220 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 FAM172AQ8WUF8 416 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 E2F7Q96AV8 911 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 PGBD4Q96DM1 585 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 FOXP3Q9BZS1 431 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 CDT1Q9H211 546 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 VPS11Q9H270 941 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 RPF1Q9H9Y2 349 aaKnown RBP13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 TSPAN16Q9UKR8 245 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 LOXHD1Q8IVV2 1947 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 GLTPD2A6NH11 291 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 SMAPO00193 183 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 EFCAB12Q6NXP0 572 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 UNC5AQ6ZN44 842 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 RGS9BPQ6ZS82 235 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 PLD5Q8N7P1 536 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 TEKT4Q8WW24 435 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 ETNK2Q9NVF9 386 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 PPM1HQ9ULR3 514 aa13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 CORO1CQ9ULV4 474 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-201ENST00000442218 NFASCO94856 1347 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 MAFGO15525 162 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 LSM8O95777 96 aaKnown RBP13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 PDGFRBP09619 1106 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 ETS2P15036 469 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 SAT1P21673 171 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 VHLP40337 213 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 TARBP2Q15633 366 aaKnown RBP13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 FAM219BQ5XKK7 198 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 PMF1Q6P1K2 205 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 LBX2Q6XYB7 198 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 RIPOR1Q6ZS17 1223 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 ANKRD13AQ8IZ07 590 aa13.6□□□□□ -0.23
SLC48A1-201ENST00000442218 PCDH19Q8TAB3 1148 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms