RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 PPCSQ9HAB8 311 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 GPRC5DQ9NZD1 345 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 KCND2Q9NZV8 630 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 TMEM98Q9Y2Y6 226 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 IKBKGQ9Y6K9 419 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 LSM1O15116 133 aaKnown RBP17.39■□□□□ 0.37
PMS1-213ENST00000441310 DENRO43583 198 aaKnown RBP17.39■□□□□ 0.37
PMS1-213ENST00000441310 LIASO43766 372 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 HDAC4P56524 1084 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 KLHL38Q2WGJ6 581 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 CES4AQ5XG92 561 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 POTEHQ6S545 545 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 NANOGNBQ7Z5D8 188 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 CBWD2Q8IUF1 395 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 GALNT4Q8N4A0 578 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 ACCSQ96QU6 501 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 SRPK1Q96SB4 655 aaKnown RBP17.39■□□□□ 0.37
PMS1-213ENST00000441310 ARMC7Q9H6L4 198 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 C10orf88Q9H8K7 445 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 PLGRKTQ9HBL7 147 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 HSPBP1Q9NZL4 362 aa17.39■□□□□ 0.37
PMS1-213ENST00000441310 SGK1O00141 431 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 CYB561D2O14569 222 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 XPO1O14980 1071 aaKnown RBP17.38■□□□□ 0.37
PMS1-213ENST00000441310 CCND2P30279 289 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 NR1H2P55055 460 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 OASLQ15646 514 aaKnown RBP17.38■□□□□ 0.37
PMS1-213ENST00000441310 NIPA1Q7RTP0 329 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 KCTD17Q8N5Z5 321 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 DEPTORQ8TB45 409 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 PLEKHO2Q8TD55 490 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 BSNDQ8WZ55 320 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 TMEM121Q9BTD3 319 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 C1orf21Q9H246 121 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 ACSS3Q9H6R3 686 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 CDH22Q9UJ99 828 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 PCDHA10Q9Y5I2 948 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 CCNT2O60583 730 aaKnown RBP17.38■□□□□ 0.37
PMS1-213ENST00000441310 CD48P09326 243 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 VAMP7P51809 220 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 PDE1CQ14123 709 aaPredicted RBP17.38■□□□□ 0.37
PMS1-213ENST00000441310 PDCD4Q53EL6 469 aaKnown RBP17.38■□□□□ 0.37
PMS1-213ENST00000441310 ANKRD22Q5VYY1 191 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 LPCAT2Q7L5N7 544 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 DEFB107AQ8IZN7 70 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 NSUN6Q8TEA1 469 aaKnown RBP17.38■□□□□ 0.37
PMS1-213ENST00000441310 E2F7Q96AV8 911 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 ERLEC1Q96DZ1 483 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 LOC100653049A0A140TA62 436 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 H3BNX3 289 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 COPEO14579 308 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 BIRC5O15392 142 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 KRT34O76011 436 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 FAM58BPP0C7Q3 252 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 GSTT2P0CG29 244 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 GSTT2BP0CG30 244 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 OGFRL1Q5TC84 451 aaPredicted RBP17.38■□□□□ 0.37
PMS1-213ENST00000441310 ZCCHC23Q6ZST2 131 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 CROCCP3Q8IVE0 287 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 TRIML2Q8N7C3 387 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 REPS2Q8NFH8 660 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 DDI1Q8WTU0 396 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 JADE3Q92613 823 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 C17orf75Q9HAS0 396 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 CNTN3Q9P232 1028 aa17.38■□□□□ 0.37
PMS1-213ENST00000441310 SEPT9Q9UHD8 586 aaPredicted RBP17.38■□□□□ 0.37
PMS1-213ENST00000441310 CBFA2T3O75081 653 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 ZMPSTE24O75844 475 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 NELFEP18615 380 aaKnown RBP17.37■□□□□ 0.37
PMS1-213ENST00000441310 NPTX2P47972 431 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 TREML2Q5T2D2 321 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 ITPRIPL1Q6GPH6 555 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 MOB2Q70IA6 237 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 ERI1Q8IV48 349 aaKnown RBP17.37■□□□□ 0.37
PMS1-213ENST00000441310 PASD1Q8IV76 773 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 AHI1Q8N157 1196 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 GSDMBQ8TAX9 411 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 APOL6Q9BWW8 343 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 STRA6Q9BX79 667 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 TOPORSQ9NS56 1045 aaPredicted RBP17.37■□□□□ 0.37
PMS1-213ENST00000441310 TSC22D4Q9Y3Q8 395 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 ITM2AO43736 263 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 KRT5P13647 590 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 RPL26P61254 145 aaKnown RBP17.37■□□□□ 0.37
PMS1-213ENST00000441310 KRT76Q01546 638 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 CCDC142Q17RM4 750 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 CRLF3Q8IUI8 442 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 APOBEC3FQ8IUX4 373 aaKnown RBP17.37■□□□□ 0.37
PMS1-213ENST00000441310 CCDC60Q8IWA6 550 aaPredicted RBP17.37■□□□□ 0.37
PMS1-213ENST00000441310 RHOT1Q8IXI2 618 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 TEX13BQ9BXU2 312 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 SLC13A1Q9BZW2 595 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 R3HDMLQ9H3Y0 253 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 ZNF696Q9H7X3 374 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 ZNF112Q9UJU3 913 aa17.37■□□□□ 0.37
PMS1-213ENST00000441310 SF3B1O75533 1304 aaKnown RBP eCLIP17.37■□□□□ 0.375e-8■■■■■ 189.5
PMS1-213ENST00000441310 CASQ2O14958 399 aaPredicted RBP17.36■□□□□ 0.37
PMS1-213ENST00000441310 PEX1O43933 1283 aa17.36■□□□□ 0.37
PMS1-213ENST00000441310 ADAM23O75077 832 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms