RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 MBD3O95983 291 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 LMNAP02545 664 aaKnown RBP14.4□□□□□ -0.1
LTBR-202ENST00000440421 FNTBP49356 437 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 NRLP54845 237 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 MESP2Q0VG99 397 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 TCP11X2Q5H9J9 407 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 BSPRYQ5W0U4 402 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 TPGS1Q6ZTW0 290 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 C11orf57Q6ZUT1 292 aaPredicted RBP14.4□□□□□ -0.1
LTBR-202ENST00000440421 SFTPA1Q8IWL2 248 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 FAM81BQ96LP2 452 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 PNKPQ96T60 521 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 FAM126AQ9BYI3 521 aaPredicted RBP14.4□□□□□ -0.1
LTBR-202ENST00000440421 MIS12Q9H081 205 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 SEMA4AQ9H3S1 761 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 SIX2Q9NPC8 291 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 CNGB3Q9NQW8 809 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 TAB2Q9NYJ8 693 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 DNAJC12Q9UKB3 198 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 STRIP2Q9ULQ0 834 aa14.4□□□□□ -0.1
LTBR-202ENST00000440421 K7EQS6 105 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 MED7O43513 233 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 KAT7O95251 611 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 PAPSS2O95340 614 aaPredicted RBP14.39□□□□□ -0.11
LTBR-202ENST00000440421 KLKB1P03952 638 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 GNA15P30679 374 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 PXNP49023 591 aaPredicted RBP14.39□□□□□ -0.11
LTBR-202ENST00000440421 DAOAP59103 153 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 COG7P83436 770 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 C2orf27AQ580R0 203 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 CCDC183Q5T5S1 534 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 Q6ZNB5 142 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 ENOX1Q8TC92 643 aaKnown RBP14.39□□□□□ -0.11
LTBR-202ENST00000440421 CLEC4CQ8WTT0 213 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 ZNF606Q8WXB4 792 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 BHMTQ93088 406 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 ARHGEF4Q9NR80 690 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 ST7Q9NRC1 585 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 SLC8A2Q9UPR5 921 aa14.39□□□□□ -0.11
LTBR-202ENST00000440421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.38□□□□□ -0.11
LTBR-202ENST00000440421 NEDD8-MDP1E9PL57 170 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 HOXC11O43248 304 aaPredicted RBP14.38□□□□□ -0.11
LTBR-202ENST00000440421 LILRB5O75023 590 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 TULP3O75386 442 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 APODP05090 189 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
LTBR-202ENST00000440421 EEF1GP26641 437 aaKnown RBP14.38□□□□□ -0.11
LTBR-202ENST00000440421 CORO1AP31146 461 aaKnown RBP14.38□□□□□ -0.11
LTBR-202ENST00000440421 EIF2DP41214 584 aaKnown RBP14.38□□□□□ -0.11
LTBR-202ENST00000440421 GPD2P43304 727 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 KCNMA1Q12791 1236 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 STX1AQ16623 288 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 DENND1CQ8IV53 801 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 FMNL3Q8IVF7 1028 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 SHC3Q92529 594 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 HSFY1Q96LI6 401 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 BBS2Q9BXC9 721 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 ABCC13Q9NSE7 274 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 OLA1Q9NTK5 396 aaKnown RBP14.38□□□□□ -0.11
LTBR-202ENST00000440421 ANO10Q9NW15 660 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 SFMBT1Q9UHJ3 866 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 ZFHX2Q9C0A1 2572 aaPredicted RBP14.38□□□□□ -0.11
LTBR-202ENST00000440421 PIEZO1Q92508 2521 aa14.38□□□□□ -0.11
LTBR-202ENST00000440421 KIAA1549LQ6ZVL6 1849 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 TRIM24O15164 1050 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 TYRP14679 529 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 GRIA2P42262 883 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 SRSF5Q13243 272 aaKnown RBP14.37□□□□□ -0.11
LTBR-202ENST00000440421 RAPGEF1Q13905 1077 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 DMC1Q14565 340 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 EMC10Q5UCC4 262 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 LONP2Q86WA8 852 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 SCUBE3Q8IX30 993 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 ETFBKMTQ8IXQ9 262 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 SCML4Q8N228 414 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 PHTF2Q8N3S3 785 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 CCDC33Q8N5R6 958 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 SUMF1Q8NBK3 374 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 USP33Q8TEY7 942 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 IRGQQ8WZA9 623 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 GOLGA1Q92805 767 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 ACDQ96AP0 544 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 HHIPQ96QV1 700 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 HINFPQ9BQA5 517 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 LSM14BQ9BX40 385 aaKnown RBP14.37□□□□□ -0.11
LTBR-202ENST00000440421 DCLK3Q9C098 648 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 VPS16Q9H269 839 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 ZDHHC4Q9NPG8 344 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 DNAJC17Q9NVM6 304 aaKnown RBP14.37□□□□□ -0.11
LTBR-202ENST00000440421 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 PLK2Q9NYY3 685 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 TMEM63CQ9P1W3 806 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 DEC1Q9P2X7 70 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 CYTH4Q9UIA0 394 aa14.37□□□□□ -0.11
LTBR-202ENST00000440421 AGO1Q9UL18 857 aaKnown RBP14.37□□□□□ -0.11
LTBR-202ENST00000440421 TBC1D3BA6NDS4 549 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 FOXN3O00409 490 aaPredicted RBP14.36□□□□□ -0.11
LTBR-202ENST00000440421 MSI1O43347 362 aaKnown RBP14.36□□□□□ -0.11
LTBR-202ENST00000440421 FBXO21O94952 628 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms