RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 OFD1O75665 1012 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 IDH1O75874 414 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 SOAT2O75908 522 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 CAMTA2O94983 1202 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 CHEK2O96017 543 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 AMY1AP04745 511 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 SRGNP10124 158 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC5A1P13866 664 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 FGFR2P21802 821 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 MSNP26038 577 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 PDIA3P30101 505 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 MCM5P33992 734 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ADD2P35612 726 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 IGHMBP2P38935 993 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 CRKLP46109 303 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 RARRES1P49788 294 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 FXR1P51114 621 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ADKP55263 362 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 FPGSQ05932 587 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 SCAPQ12770 1279 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 TRDNQ13061 729 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ITPK1Q13572 414 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 PUM3Q15397 648 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 GEN1Q17RS7 908 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 CCDC152Q4G0S7 254 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 INO80DQ53TQ3 878 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ATAT1Q5SQI0 421 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 AKNAD1Q5T1N1 836 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC9C2Q5TAH2 1124 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ATL3Q6DD88 541 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 FAM173BQ6P4H8 233 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZNF365Q70YC5 407 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 PTF1AQ7RTS3 328 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 CATIPQ7Z7H3 387 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 TTC7BQ86TV6 843 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZSCAN30Q86W11 494 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 PPM1NQ8N819 430 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZBTB34Q8NCN2 500 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 NSUN7Q8NE18 718 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 DIS3LQ8TF46 1054 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 SNX19Q92543 992 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 HPS3Q969F9 1004 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 MARS2Q96GW9 593 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 PGBD1Q96JS3 809 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZNF396Q96N95 335 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 MPHOSPH8Q99549 860 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 LRRC2Q9BYS8 371 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 GTPBP4Q9BZE4 634 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 MAF1Q9H063 256 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 PIH1D3Q9NQM4 214 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 RLIMQ9NVW2 624 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 SERPINB13Q9UIV8 391 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 TUBD1Q9UJT1 453 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 NAP1L2Q9ULW6 460 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 NIP7Q9Y221 180 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 CDYLQ9Y232 598 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 SPATA31A5Q5VU36 1347 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 UBN2Q6ZU65 1347 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 SPATA31A7Q8IWB4 1347 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 WDR19Q8NEZ3 1342 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZNF532Q9HCE3 1301 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 COL22A1Q8NFW1 1626 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 RIC1Q4ADV7 1423 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 SPEF2Q9C093 1822 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 KLF18A0A0U1RQI7 1052 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 E7ENX8 843 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 GCOM1H8Y6P7 765 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 TOR1BO14657 336 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 YY2O15391 372 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 TOM1O60784 492 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 CTDNEP1O95476 244 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZBED1O96006 694 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 HRGP04196 525 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 CD1AP06126 327 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 PTMAP06454 111 aaKnown RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 POU2F2P09086 479 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 FTH1P19P0C7X4 201 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 CCDC192P0DO97 292 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 GPD1P21695 349 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 SMARCA1P28370 1054 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 PHKA1P46020 1223 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 CLK3P49761 638 aaKnown RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 ANXA11P50995 505 aaKnown RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 NXPH1P58417 271 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 HAND2P61296 217 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 NOMO3P69849 1222 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 SIM1P81133 766 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 NHLH1Q02575 133 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 TAP2Q03519 686 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 ITIH3Q06033 890 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 HLXQ14774 488 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 ALX1Q15699 326 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 TMEM95Q3KNT9 176 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 FAM153CQ494X1 144 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 NOMO2Q5JPE7 1267 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 KIAA1614Q5VZ46 1190 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 CLEC4GQ6UXB4 293 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 CHST3Q7LGC8 479 aa3.87□□□□□ -1.79
HMGB3P11-201ENST00000440127 OVCH2Q7RTZ1 564 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms