RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 FBXO9Q9UK97 447 aaPredicted RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 LOC100653049A0A140TA62 436 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 LPXNO60711 386 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 KRT34O76011 436 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 ZBTB11O95625 1053 aaPredicted RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 ESRRBO95718 433 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 ZBED1O96006 694 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 COL6A2P12110 1019 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 PCSK6P29122 969 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 SLC25A3Q00325 362 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 EGFLAMQ63HQ2 1017 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 CDR2LQ86X02 465 aaPredicted RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 EFCAB3Q8N7B9 438 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 PDZD8Q8NEN9 1154 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 FBXO40Q9UH90 709 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 NOP56O00567 594 aaKnown RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 VILLO15195 856 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 NELFEP18615 380 aaKnown RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 ACTR3P61158 418 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 ITGADQ13349 1161 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 MAPK6Q16659 721 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 TRABD2AQ86V40 505 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 PDIK1LQ8N165 341 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 KCTD6Q8NC69 237 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 NSUN6Q8TEA1 469 aaKnown RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 ACAP3Q96P50 834 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 KIAA1586Q9HCI6 787 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 FAM237BA0A1B0GVD1 139 aa16.33■□□□□ 0.21
DHFR-201ENST00000439211 E9PBE3 544 aa16.33■□□□□ 0.21
DHFR-201ENST00000439211 INHBAP08476 426 aa16.33■□□□□ 0.21
DHFR-201ENST00000439211 FDFT1P37268 417 aa16.33■□□□□ 0.21
DHFR-201ENST00000439211 GCNT1Q02742 428 aa16.33■□□□□ 0.21
DHFR-201ENST00000439211 BBS5Q8N3I7 341 aa16.33■□□□□ 0.21
DHFR-201ENST00000439211 PRR11Q96HE9 360 aaPredicted RBP16.33■□□□□ 0.21
DHFR-201ENST00000439211 CCDC138Q96M89 665 aa16.33■□□□□ 0.21
DHFR-201ENST00000439211 PRICKLE1Q96MT3 831 aaPredicted RBP16.33■□□□□ 0.21
DHFR-201ENST00000439211 TLE6Q9H808 572 aa16.33■□□□□ 0.21
DHFR-201ENST00000439211 SCHIP1Q9P0W5 487 aaPredicted RBP16.33■□□□□ 0.21
DHFR-201ENST00000439211 TAGLN3Q9UI15 199 aa16.33■□□□□ 0.21
DHFR-201ENST00000439211 MAST2Q6P0Q8 1798 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 YDJCA8MPS7 323 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 F8VP50 259 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 H7C0C1 242 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 PIK3R2O00459 728 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 EXTL3O43909 919 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 TM7SF2O76062 418 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 RARBP10826 455 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 MCF2P10911 925 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 ATP5OP48047 213 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 SNRPFP62306 86 aaKnown RBP16.33■□□□□ 0.2
DHFR-201ENST00000439211 OTUD4Q01804 1114 aaKnown RBP16.33■□□□□ 0.2
DHFR-201ENST00000439211 EN1Q05925 392 aaPredicted RBP16.33■□□□□ 0.2
DHFR-201ENST00000439211 CDO1Q16878 200 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 C3orf62Q6ZUJ4 267 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 WWP1Q9H0M0 922 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 FAM32AQ9Y421 112 aaKnown RBP16.33■□□□□ 0.2
DHFR-201ENST00000439211 ACTL7BQ9Y614 415 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 ATP8B3O60423 1300 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 SERPINB7O75635 380 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 CFHP08603 1231 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 BCAP31P51572 246 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 CYP1B1Q16678 543 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 FAAH2Q6GMR7 532 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 PAOXQ6QHF9 649 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 UTS2BQ765I0 119 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 RCOR2Q8IZ40 523 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 ZNF398Q8TD17 642 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 TCP10LQ8TDR4 215 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 NSMCE3Q96MG7 304 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 AGAP3Q96P47 875 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 PPP1R16BQ96T49 567 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 CYP26B1Q9NR63 512 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 PXMP2Q9NR77 195 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 UBIAD1Q9Y5Z9 338 aa16.33■□□□□ 0.2
DHFR-201ENST00000439211 RREB1Q92766 1687 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 FUOMA2VDF0 154 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 KLRG2A4D1S0 409 aaPredicted RBP16.32■□□□□ 0.2
DHFR-201ENST00000439211 INO80B-WBP1J3KQ70 363 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 CETPP11597 493 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 SSTR1P30872 391 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 ORC1Q13415 861 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 FASTKD3Q14CZ7 662 aaKnown RBP16.32■□□□□ 0.2
DHFR-201ENST00000439211 EMC2Q15006 297 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 NLRP7Q8WX94 980 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 ANKRD36BP1Q96IX9 119 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 INO80BQ9C086 356 aaPredicted RBP16.32■□□□□ 0.2
DHFR-201ENST00000439211 AP4B1Q9Y6B7 739 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 SMCHD1A6NHR9 2005 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 A0A1W2PPM1 405 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 NCF2P19878 526 aaPredicted RBP16.32■□□□□ 0.2
DHFR-201ENST00000439211 BGNP21810 368 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 DSG3P32926 999 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 FAM182AQ5T1J6 154 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 TRIM72Q6ZMU5 477 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 C12orf56Q8IXR9 622 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 ABRAQ8N0Z2 381 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 USP33Q8TEY7 942 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 HPS1Q92902 700 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 CD101Q93033 1021 aa16.32■□□□□ 0.2
DHFR-201ENST00000439211 HERPUD2Q9BSE4 406 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms