RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ELOVL4Q9GZR5 314 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 KANSL3Q9P2N6 904 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 MCM8Q9UJA3 840 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 L3MBTL1Q9Y468 752 aa11.98□□□□□ -0.49
TRAPPC9-202ENST00000438773 FSCN2O14926 492 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 CILPO75339 1184 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZNF143P52747 638 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 TARBP2Q15633 366 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 PREPLQ4J6C6 727 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 C9orf57Q5W0N0 161 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 IFNL1Q8IU54 200 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 FBXO32Q969P5 355 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 SMARCD1Q96GM5 515 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 MYH11P35749 1972 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 O00370 1275 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 DDX3YO15523 660 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 MTSS1O43312 755 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 SNAI1O95863 264 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 AMPD1P23109 780 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 PRAMEP78395 509 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 C4orf22Q6V702 233 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 DENND5BQ6ZUT9 1274 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 TMEM86AQ8N2M4 240 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 FBXO36Q8NEA4 188 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 PIP4K2CQ8TBX8 421 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 HSFY1Q96LI6 401 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 TRIM55Q9BYV6 548 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 PCYOX1Q9UHG3 505 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 XPAP23025 273 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 ENPEPQ07075 957 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 PTK7Q13308 1070 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 ACCSLQ4AC99 568 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 CAPRIN2Q6IMN6 1127 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZNF280DQ6N043 979 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 MON1BQ7L1V2 547 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 SGSM3Q96HU1 749 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 FRMD8Q9BZ67 464 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 VCX3BQ9H321 246 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 ERVK-5Q9HDB9 667 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 DMAP1Q9NPF5 467 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 MORF4L1Q9UBU8 362 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 MAST2Q6P0Q8 1798 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 MYH4Q9Y623 1939 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 FAM47DPA6NHR8 397 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 APOC4-APOC2K7ER74 178 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 DNALI1O14645 258 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 SPAG6O75602 509 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZNF189O75820 626 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 APOC2P02655 101 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 USP17L7P0C7H9 530 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 PECAM1P16284 738 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 NPR3P17342 541 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 POU5F1BQ06416 359 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 ITGA7Q13683 1181 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 GRB14Q14449 540 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 FAM171A1Q5VUB5 890 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 SPATA24Q86W54 205 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 RASSF3Q86WH2 238 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 TSC22D3Q99576 134 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 LHX5Q9H2C1 402 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 XAB2Q9HCS7 855 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 TRPC7Q9HCX4 862 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 MID2Q9UJV3 735 aa11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 SMG5Q9UPR3 1016 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-202ENST00000438773 CLDN5O00501 218 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 HOXA2O43364 376 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 KPNA2P52292 529 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 ASPHQ12797 758 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 RPS6KA2Q15349 733 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 TAS1R3Q7RTX0 852 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 ELMOD1Q8N336 334 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 EIF1ADQ8N9N8 165 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 SHOC2Q9UQ13 582 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 FIS1Q9Y3D6 152 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 LTFP02788 710 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 GHRHRQ02643 423 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 KCNA10Q16322 511 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 PCSK7Q16549 785 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 LRRC6Q86X45 466 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 CRLF3Q8IUI8 442 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 NUDCD3Q8IVD9 361 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 RASGEF1CQ8N431 466 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 IPMKQ8NFU5 416 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 SKA2Q8WVK7 121 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 RPRD1AQ96P16 312 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 B3GNT5Q9BYG0 378 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 MAGEB5Q9BZ81 275 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 LRRC19Q9H756 370 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 DERAQ9Y315 318 aa11.96□□□□□ -0.49
TRAPPC9-202ENST00000438773 COL5A3P25940 1745 aaPredicted RBP11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 CCDC195A0A1B0GUA6 201 aa11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 RIPK2O43353 540 aa11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 GPC4O75487 556 aa11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 DRD4P21917 467 aa11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 IFI35P80217 286 aaPredicted RBP11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 ANO4Q32M45 955 aa11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 CCDC124Q96CT7 223 aaKnown RBP11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 CEP41Q9BYV8 373 aa11.96□□□□□ -0.5
TRAPPC9-202ENST00000438773 PPCSQ9HAB8 311 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms