RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CUL4BQ13620 913 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 SGSM1Q2NKQ1 1148 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 LY6G5CQ5SRR4 150 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 C10orf76Q5T2E6 689 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 RESP18Q5W5W9 173 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 CEP135Q66GS9 1140 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 GRAMD4Q6IC98 578 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 SDE2Q6IQ49 451 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 PSAPL1Q6NUJ1 521 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 ACOT1Q86TX2 421 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 MDGA1Q8NFP4 955 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 PIGKQ92643 395 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 TAF4BQ92750 862 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 EZH1Q92800 747 aaPredicted RBP8.21□□□□□ -1.1
VPS50-204ENST00000438395 JAKMIP2Q96AA8 810 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 NUSAP1Q9BXS6 441 aaKnown RBP8.21□□□□□ -1.1
VPS50-204ENST00000438395 BACH2Q9BYV9 841 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 RNF38Q9H0F5 515 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 XYLT2Q9H1B5 865 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 FBXO44Q9H4M3 255 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 TMEM9BQ9NQ34 198 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 FAM49BQ9NUQ9 324 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 GMIPQ9P107 970 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 CACNA1GO43497 2377 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 ANK1P16157 1881 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 CHD6Q8TD26 2715 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 SPAG17Q6Q759 2223 aa8.21□□□□□ -1.1
VPS50-204ENST00000438395 LNP1A1A4G5 178 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 LRRIQ3A6PVS8 624 aaPredicted RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 C4orf47A7E2U8 309 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 K7EQS6 105 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 HOXC11O43248 304 aaPredicted RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 WIPF1O43516 503 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 CALUO43852 315 aaPredicted RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 MAN1A2O60476 641 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 KCNK5O95279 499 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 NR3C1P04150 777 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 CFIP05156 583 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 MYL1P05976 194 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 KRT13P13646 458 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 CCDC130P13994 396 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 ADORA2BP29275 332 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 GMPRP36959 345 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 CACNA2D1P54289 1103 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 CDH8P55286 799 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 ZNF252P-AS1Q0IIN9 211 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 LMAN2Q12907 356 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 UAP1L1Q3KQV9 507 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 N4BP2L1Q5TBK1 243 aaPredicted RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 LYSMD4Q5XG99 296 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 RHBDF2Q6PJF5 856 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 ARMCX6Q7L4S7 300 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 TADA2BQ86TJ2 420 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 UNC93AQ86WB7 457 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 RASSF3Q86WH2 238 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 GRAMD1CQ8IYS0 662 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 ADGRG2Q8IZP9 1017 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 ZNF513Q8N8E2 541 aaPredicted RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 IL17RCQ8NAC3 791 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 SCAMP5Q8TAC9 235 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 SLC2A14Q8TDB8 520 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 PARD3BQ8TEW8 1205 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 SNX21Q969T3 373 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 CCDC34Q96HJ3 373 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 XPO6Q96QU8 1125 aaKnown RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 KCNK16Q96T55 309 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 LSM14BQ9BX40 385 aaKnown RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 CCSER2Q9H7U1 834 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 VRTNQ9H8Y1 702 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.2□□□□□ -1.1
VPS50-204ENST00000438395 TLR8Q9NR97 1041 aaKnown RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 TMPRSS4Q9NRS4 437 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 RXFP3Q9NSD7 469 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 DNAJC17Q9NVM6 304 aaKnown RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 COMMD8Q9NX08 183 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 CHORDC1Q9UHD1 332 aaPredicted RBP8.2□□□□□ -1.1
VPS50-204ENST00000438395 USP25Q9UHP3 1055 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 PCDHA7Q9UN72 937 aa8.2□□□□□ -1.1
VPS50-204ENST00000438395 KIF26AQ9ULI4 1882 aaPredicted RBP8.19□□□□□ -1.1
VPS50-204ENST00000438395 NEDD8-MDP1E9PL57 170 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 H3BM21 787 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 SGK1O00141 431 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 PDXKO00764 312 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 AP5Z1O43299 807 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 TULP3O75386 442 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 HOXB2P14652 356 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 RPL13P26373 211 aaKnown RBP8.19□□□□□ -1.1
VPS50-204ENST00000438395 ATP5C1P36542 298 aaKnown RBP8.19□□□□□ -1.1
VPS50-204ENST00000438395 P2RY2P41231 377 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 MAPK8P45983 427 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 SLC6A11P48066 632 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 NDST1P52848 882 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 MAP3K7CLP57077 242 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 SLC8A3P57103 927 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 ZXDBP98169 803 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 DNM1Q05193 864 aaKnown RBP8.19□□□□□ -1.1
VPS50-204ENST00000438395 EHHADHQ08426 723 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 ORC1Q13415 861 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 ZACNQ401N2 412 aa8.19□□□□□ -1.1
VPS50-204ENST00000438395 TRIM61Q5EBN2 209 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms