RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 C12orf60Q5U649 245 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 DCAF12L1Q5VU92 463 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 CPLX2Q6PUV4 134 aaKnown RBP6.93□□□□□ -1.3
SPEN-202ENST00000438066 OLFM4Q6UX06 510 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 VSIG10LQ86VR7 867 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 C2CD5Q86YS7 1000 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 SDR16C5Q8N3Y7 309 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 DNAJC5GQ8N7S2 189 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 SH3RF3Q8TEJ3 882 aaPredicted RBP6.93□□□□□ -1.3
SPEN-202ENST00000438066 C8orf76Q96K31 380 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 COA1Q9GZY4 146 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 A1CFQ9NQ94 594 aaKnown RBP6.93□□□□□ -1.3
SPEN-202ENST00000438066 MBNL3Q9NUK0 354 aaKnown RBP6.93□□□□□ -1.3
SPEN-202ENST00000438066 KIF17Q9P2E2 1029 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 CFAP45Q9UL16 551 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 TMEM98Q9Y2Y6 226 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 C10orf71Q711Q0 1435 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 GREB1LQ9C091 1923 aaPredicted RBP6.93□□□□□ -1.3
SPEN-202ENST00000438066 A0A087WZ62 844 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 ERICH2A1L162 156 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 PRDM1O75626 825 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 KLHL18O94889 574 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 UNC5CO95185 931 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 BAG3O95817 575 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 RAP2AP10114 183 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 DUSP2Q05923 314 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 EZH2Q15910 746 aaKnown RBP6.93□□□□□ -1.3
SPEN-202ENST00000438066 RSPO4Q2I0M5 234 aaPredicted RBP6.93□□□□□ -1.3
SPEN-202ENST00000438066 FAM26FQ5R3K3 315 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 AFMIDQ63HM1 303 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 OTUD7BQ6GQQ9 843 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 TANGO2Q6ICL3 276 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 CLEC14AQ86T13 490 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 NBPF11Q86T75 865 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 CPOQ8IVL8 374 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 ZDHHC14Q8IZN3 488 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 PCYOX1LQ8NBM8 494 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 PGBD1Q96JS3 809 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 MAELQ96JY0 434 aaKnown RBP6.93□□□□□ -1.3
SPEN-202ENST00000438066 USP28Q96RU2 1077 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 PRPF18Q99633 342 aaKnown RBP6.93□□□□□ -1.3
SPEN-202ENST00000438066 FTOQ9C0B1 505 aaKnown RBP eCLIP6.93□□□□□ -1.3
SPEN-202ENST00000438066 BRD9Q9H8M2 597 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 MLXIPQ9HAP2 919 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 MID2Q9UJV3 735 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 RCOR1Q9UKL0 485 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 AFG3L2Q9Y4W6 797 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 SIPA1L1O43166 1804 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 GOLGB1Q14789 3259 aaKnown RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 CCDC196A0A1B0GTZ2 297 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 KIF28PB7ZC32 967 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 DYRK3O43781 588 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 SOAT2O75908 522 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 KNG1P01042 644 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 HMGCRP04035 888 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 RNASE1P07998 156 aaKnown RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 GJB1P08034 283 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 SLC3A2P08195 630 aaKnown RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 ITGA5P08648 1049 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 TXNP10599 105 aaKnown RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 KLRC1P26715 233 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 BTDP43251 543 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 SLC11A2P49281 568 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 TROAPQ12815 778 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 KIF22Q14807 665 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 EIF4HQ15056 248 aaKnown RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 PPP2R5BQ15173 497 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 PABPC1LQ4VXU2 614 aaKnown RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 KLHL17Q6TDP4 642 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 SYNE3Q6ZMZ3 975 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 IQCA1Q86XH1 822 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 IPCEF1Q8WWN9 437 aaPredicted RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 GFM2Q969S9 779 aaKnown RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 ZBTB10Q96DT7 871 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 ZNF396Q96N95 335 aaPredicted RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 GORASP1Q9BQQ3 440 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 MCM9Q9NXL9 1143 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 SLC13A4Q9UKG4 626 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 FAM184BQ9ULE4 1060 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 TBC1D30Q9Y2I9 924 aa6.92□□□□□ -1.3
SPEN-202ENST00000438066 BAZ2BQ9UIF8 2168 aaKnown RBP6.92□□□□□ -1.3
SPEN-202ENST00000438066 FLT1P17948 1338 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 A0A0U1RQG5 324 aaPredicted RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 UBE2Q2LH0YL09 131 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 KIAA0391O15091 583 aaKnown RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 HOXC11O43248 304 aaPredicted RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 LETM1O95202 739 aaPredicted RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 ITGB2P05107 769 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 GYPEP15421 78 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 ALOX15P16050 662 aaPredicted RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 U2AF2P26368 475 aaKnown RBP eCLIP6.91□□□□□ -1.3
SPEN-202ENST00000438066 IL1R2P27930 398 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 POLD1P28340 1107 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 BRCA1P38398 1863 aaKnown RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 KIR2DL3P43628 341 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 NCKAP1LP55160 1127 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 UCP3P55916 312 aa6.91□□□□□ -1.3
SPEN-202ENST00000438066 PSMC1P62191 440 aaKnown RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 INSM1Q01101 510 aaPredicted RBP6.91□□□□□ -1.3
SPEN-202ENST00000438066 SURF1Q15526 300 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms