RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 DOLKQ9UPQ8 538 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 CORO2BQ9UQ03 480 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 PBRM1Q86U86 1689 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 NR3C2P08235 984 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 FDX1P10109 184 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 HOXC8P31273 242 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 DDR1Q08345 913 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 GRIK3Q13003 919 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 UBE2SQ16763 222 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TIGD7Q6NT04 549 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 MAGEC3Q8TD91 643 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 SLC9A7Q96T83 725 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 CHP1Q99653 195 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 CDH9Q9ULB4 789 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ARHGEF33A8MVX0 844 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 SMNDC1O75940 238 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 SERPINE1P05121 402 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 SERPIND1P05546 499 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TPBGLP0DKB5 382 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF12P17014 697 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 COMTP21964 271 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 GRM4Q14833 912 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TMIEQ8NEW7 156 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 UTP15Q8TED0 518 aaKnown RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 CLN6Q9NWW5 311 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 RUVBL2Q9Y230 463 aaKnown RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 SLC1A6P48664 564 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 BST2Q10589 180 aaKnown RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 POLNQ7Z5Q5 900 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TRPV1Q8NER1 839 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 EPS8L3Q8TE67 593 aaKnown RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 S100A13Q99584 98 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 DNAJC16Q9Y2G8 782 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 CPSF1Q10570 1443 aaKnown RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 MGAT4DA6NG13 374 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 MDM4O15151 490 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 CYP2C8P10632 490 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TSGA10IPQ3SY00 556 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ACCSLQ4AC99 568 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 PYDC2Q56P42 97 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ZSWIM1Q9BR11 485 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 KLHL11Q9NVR0 708 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TMEM51Q9NW97 253 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 NDUFAF1Q9Y375 327 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 SAMD9Q5K651 1589 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 PSMD12O00232 456 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 MAGEB2O15479 319 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ARL4DP49703 201 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 GEMP55040 296 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 VBP1P61758 197 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TNK2Q07912 1038 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ZNF438Q7Z4V0 828 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 TMEM237Q96Q45 408 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 KATNAL1Q9BW62 490 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 C1QTNF1Q9BXJ1 281 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 POLR3FQ9H1D9 316 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-209ENST00000437951 PRDM8Q9NQV8 689 aa11.85□□□□□ -0.51
PTCH1-209ENST00000437951 ALDH1A1P00352 501 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 GPD1P21695 349 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 BTN3A2P78410 334 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 GALNTL6Q49A17 601 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 USP17L2Q6R6M4 530 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 MIER2Q8N344 545 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 MSL3Q8N5Y2 521 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 FEZF2Q8TBJ5 459 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 DCLK3Q9C098 648 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 LRRC40Q9H9A6 602 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 PTPRKQ15262 1439 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 SLC16A4O15374 487 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 HS6ST1O60243 411 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 NOS1APO75052 506 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 KHDRBS3O75525 346 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 LARGE1O95461 756 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 ALADP13716 330 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 PDGFRAP16234 1089 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 POU1F1P28069 291 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 FRG1Q14331 258 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 RFX4Q33E94 735 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 BOLA3Q53S33 107 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 LRRC71Q8N4P6 559 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 ARL10Q8N8L6 244 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 NOA1Q8NC60 698 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 AATKQ6ZMQ8 1374 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 F5H423 210 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 CLK4Q9HAZ1 481 aaKnown RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 AHSPQ9NZD4 102 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 LBPP18428 481 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 CHSY1Q86X52 802 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 UNC5CLQ8IV45 518 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 SFRP1Q8N474 314 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 BHMTQ93088 406 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 SLC25A23Q9BV35 468 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 FICDQ9BVA6 458 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 FAM217BQ9NTX9 383 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-209ENST00000437951 CMTM6Q9NX76 183 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 TMEM216Q9P0N5 145 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 SLC25A13Q9UJS0 675 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 NUDT5Q9UKK9 219 aa11.84□□□□□ -0.51
PTCH1-209ENST00000437951 ZC3H4Q9UPT8 1303 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms