RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 SYT12Q8IV01 421 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 THEM5Q8N1Q8 247 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 TMEM161BQ8NDZ6 487 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 OSCP1Q8WVF1 389 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 PIGKQ92643 395 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 KCNN1Q92952 543 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 TMEM206Q9H813 350 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 DUS2Q9NX74 493 aaKnown RBP9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 UXTQ9UBK9 157 aaPredicted RBP9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 SCN1AP35498 2009 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 ADAMTS20P59510 1910 aa9.05□□□□□ -0.96
NIF3L1-208ENST00000436412 PTPRQQ9UMZ3 2332 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 LOC100289279A0A1B0GTE1 492 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 KIAA1324LA8MWY0 1029 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 LACTBL1A8MY62 500 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 CSH1P0DML2 217 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 CSH2P0DML3 217 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 PLS3P13797 630 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 HMGA1P17096 107 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 IFNAR2P48551 515 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 TRAPPC10P48553 1259 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 SIM1P81133 766 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 SPAG1Q07617 926 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 PSMD2Q13200 908 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 SEMA3BQ13214 749 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 MTF1Q14872 753 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 ZNF174Q15697 407 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 ZNF423Q2M1K9 1284 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 HSF5Q4G112 596 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 SEZ6Q53EL9 994 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 KRT79Q5XKE5 535 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 TXNDC8Q6A555 127 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 KIAA1211LQ6NV74 962 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 SLC23A3Q6PIS1 610 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 RABEPKQ7Z6M1 372 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 GALNT12Q8IXK2 581 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 DCP1BQ8IZD4 617 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 IGSF22Q8N9C0 903 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 NSUN7Q8NE18 718 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 OR10T2Q8NGX3 314 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 OLIG1Q8TAK6 271 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 CEP76Q8TAP6 659 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 USP33Q8TEY7 942 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 GIPC2Q8TF65 315 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 EZH1Q92800 747 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 GTF3C6Q969F1 213 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 FOXP1Q9H334 677 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 RPF1Q9H9Y2 349 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 PCMTD2Q9NV79 361 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 KCND2Q9NZV8 630 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 KLK13Q9UKR3 277 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 MMP17Q9ULZ9 603 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 DERAQ9Y315 318 aa9.04□□□□□ -0.96
NIF3L1-208ENST00000436412 PTPRDP23468 1912 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 MYO16Q9Y6X6 1858 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 A0A1W2PP55 124 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 ANO9A1A5B4 782 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 E9PMD0 336 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 PIRO00625 290 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 OGTO15294 1046 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 TIAF1O95411 115 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 CAPNS1P04632 268 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 USP17L7P0C7H9 530 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 TCF3P15923 654 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 BCKDHBP21953 392 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 U2AF2P26368 475 aaKnown RBP eCLIP9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 NMT1P30419 496 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 P2RY2P41231 377 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 ATXN3P54252 364 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 MRPS21P82921 87 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 ZNF77Q15935 545 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 ENOX2Q16206 610 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 CRY1Q16526 586 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 NFE2Q16621 373 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 SOWAHCQ53LP3 525 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 TTC38Q5R3I4 469 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 C9orf57Q5W0N0 161 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 ANO7Q6IWH7 933 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 HDDC3Q8N4P3 179 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 C4orf32Q8N8J7 132 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 KIAA1958Q8N8K9 716 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 BICD1Q96G01 975 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 TRMT2BQ96GJ1 504 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 TCF12Q99081 682 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 TPSD1Q9BZJ3 242 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 CCSER1Q9C0I3 900 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 INVSQ9Y283 1065 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 PCDHB5Q9Y5E4 795 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 KIAA1549LQ6ZVL6 1849 aa9.03□□□□□ -0.96
NIF3L1-208ENST00000436412 HECTD1Q9ULT8 2610 aa9.02□□□□□ -0.96
NIF3L1-208ENST00000436412 ANK1P16157 1881 aa9.02□□□□□ -0.96
NIF3L1-208ENST00000436412 PLXND1Q9Y4D7 1925 aa9.02□□□□□ -0.97
NIF3L1-208ENST00000436412 TRAV19A0A0A6YYK7 116 aa9.02□□□□□ -0.97
NIF3L1-208ENST00000436412 SPAARA0A1B0GVQ0 90 aa9.02□□□□□ -0.97
NIF3L1-208ENST00000436412 K7EQS6 105 aa9.02□□□□□ -0.97
NIF3L1-208ENST00000436412 CYB561D2O14569 222 aa9.02□□□□□ -0.97
NIF3L1-208ENST00000436412 PPEF2O14830 753 aa9.02□□□□□ -0.97
NIF3L1-208ENST00000436412 FAM189A1O60320 539 aa9.02□□□□□ -0.97
NIF3L1-208ENST00000436412 DTNBO60941 627 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms