RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 SNX17Q15036 470 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 ARL13BQ3SXY8 428 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 RNASEH2BQ5TBB1 312 aaKnown RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 BZW1Q7L1Q6 419 aaKnown RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 MAGEB18Q96M61 343 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 FGD4Q96M96 766 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 FAM193BQ96PV7 902 aaPredicted RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 OSBPL7Q9BZF2 842 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 PTPRHQ9HD43 1115 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 PAPSS1O43252 624 aaPredicted RBP11.82□□□□□ -0.52
CLDN4-202ENST00000431918 IVDP26440 423 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 ACADSBP45954 432 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 FAAP100Q0VG06 881 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 MFSD5Q6N075 450 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 CES3Q6UWW8 571 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 TTC30AQ86WT1 665 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 PARP9Q8IXQ6 854 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 SLCO2A1Q92959 643 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 YIPF3Q9GZM5 350 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 H0Y3Z8 333 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 GHRP10912 638 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 KLRC2P26717 231 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 PNPLA4P41247 253 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 ZNF618Q5T7W0 954 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 CKAP2Q8WWK9 683 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 CENPTQ96BT3 561 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 TBCBQ99426 244 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 BCO2Q9BYV7 579 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 TXLNGYQ9BZA5 131 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 PCDH18Q9HCL0 1135 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 ZFP69BQ9UJL9 534 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 MCM3APO60318 1980 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 C2CD4BA6NLJ0 364 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLDN4-202ENST00000431918 ALOX15BO15296 676 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 USP12O75317 370 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 TMEM63AO94886 807 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 GOT1P17174 413 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 CA8P35219 290 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 RGS2P41220 211 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 SLC25A11Q02978 314 aaKnown RBP11.82□□□□□ -0.52
CLDN4-202ENST00000431918 MAP2K5Q13163 448 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 CCDC142Q17RM4 750 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 FAM110CQ1W6H9 321 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 RAPH1Q70E73 1250 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 NDUFAF2Q8N183 169 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
CLDN4-202ENST00000431918 GBP7Q8N8V2 638 aaPredicted RBP11.82□□□□□ -0.52
CLDN4-202ENST00000431918 TFB1MQ8WVM0 346 aaKnown RBP11.82□□□□□ -0.52
CLDN4-202ENST00000431918 ITFG2Q969R8 447 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 UBP1Q9NZI7 540 aa11.82□□□□□ -0.52
CLDN4-202ENST00000431918 TARSP26639 723 aaKnown RBP11.81□□□□□ -0.52
CLDN4-202ENST00000431918 ZRSR2Q15696 482 aaKnown RBP11.81□□□□□ -0.52
CLDN4-202ENST00000431918 VSTM1Q6UX27 236 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 TRABD2AQ86V40 505 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 NT5DC4Q86YG4 428 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 NUDCD3Q8IVD9 361 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 PYROXD2Q8N2H3 581 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 FNIP1Q8TF40 1166 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 ATXN2LQ8WWM7 1075 aaKnown RBP11.81□□□□□ -0.52
CLDN4-202ENST00000431918 PEBP4Q96S96 227 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 LGMNQ99538 433 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 CXCL16Q9H2A7 254 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 PLEKHA5Q9HAU0 1116 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 CNTN6Q9UQ52 1028 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 MYO18AQ92614 2054 aaKnown RBP11.81□□□□□ -0.52
CLDN4-202ENST00000431918 THP07101 528 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 EPHB2P29323 1055 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 PCK1P35558 622 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 YWHAZP63104 245 aaKnown RBP11.81□□□□□ -0.52
CLDN4-202ENST00000431918 ACAP1Q15027 740 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 SPRYD7Q5W111 196 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 CYB5D1Q6P9G0 228 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 SLC35B2Q8TB61 432 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 TSSK1BQ9BXA7 367 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 PPARGC1AQ9UBK2 798 aaKnown RBP11.81□□□□□ -0.52
CLDN4-202ENST00000431918 SLC24A2Q9UI40 661 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 NUDT5Q9UKK9 219 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 DFFAO00273 331 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 SNUPNO95149 360 aaKnown RBP11.81□□□□□ -0.52
CLDN4-202ENST00000431918 RASSF2P50749 326 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 SCNN1GP51170 649 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 ARFIP2P53365 341 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 MFSD14CQ5VZR4 134 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 PLD5Q8N7P1 536 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 B3GALNT2Q8NCR0 500 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 AGR3Q8TD06 166 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 RNF139Q8WU17 664 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 FAXDC2Q96IV6 333 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 SENP8Q96LD8 212 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 ULBP1Q9BZM6 244 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 NACA2Q9H009 215 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 NRDE2Q9H7Z3 1164 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 TXLNGQ9NUQ3 528 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 MCM8Q9UJA3 840 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 PRG3Q9Y2Y8 225 aaPredicted RBP11.81□□□□□ -0.52
CLDN4-202ENST00000431918 IPPQ9Y573 584 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 SSC5DA1L4H1 1573 aa11.81□□□□□ -0.52
CLDN4-202ENST00000431918 SLC15A5A6NIM6 579 aa11.8□□□□□ -0.52
CLDN4-202ENST00000431918 DNM1LO00429 736 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms