RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 SCML2Q9UQR0 700 aa17.83■□□□□ 0.45
UBE3D-204ENST00000430071 SIK3Q9Y2K2 1263 aa17.83■□□□□ 0.45
UBE3D-204ENST00000430071 CNOT1A5YKK6 2376 aaKnown RBP17.83■□□□□ 0.45
UBE3D-204ENST00000430071 A0A1B0GTH6 734 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 TRIM24O15164 1050 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 AMPD2Q01433 879 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 UBXN1Q04323 297 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 SYCP1Q15431 976 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 EMC10Q5UCC4 262 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 WDR5BQ86VZ2 330 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 LONP2Q86WA8 852 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 TTC30AQ86WT1 665 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 NDRG1Q92597 394 aaKnown RBP17.82■□□□□ 0.44
UBE3D-204ENST00000430071 RMDN1Q96DB5 314 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 P2RY11Q96G91 374 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 TMEM176AQ96HP8 235 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 LSM14BQ9BX40 385 aaKnown RBP17.82■□□□□ 0.44
UBE3D-204ENST00000430071 FBXO44Q9H4M3 255 aa17.82■□□□□ 0.44
UBE3D-204ENST00000430071 UBE2TQ9NPD8 197 aaPredicted RBP17.82■□□□□ 0.44
UBE3D-204ENST00000430071 TLR8Q9NR97 1041 aaKnown RBP17.82■□□□□ 0.44
UBE3D-204ENST00000430071 E2F8A0AVK6 867 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 SERPINC1P01008 464 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 RARGP13631 454 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 HNRNPLP14866 589 aaKnown RBP eCLIP17.81■□□□□ 0.44
UBE3D-204ENST00000430071 TUBP50607 506 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 SIM2Q14190 667 aaPredicted RBP17.81■□□□□ 0.44
UBE3D-204ENST00000430071 C2orf27AQ580R0 203 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 TMEM25Q86YD3 366 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 NAT16Q8N8M0 369 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 USP33Q8TEY7 942 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 ERGIC2Q96RQ1 377 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 SLC8A2Q9UPR5 921 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 USP3Q9Y6I4 520 aa17.81■□□□□ 0.44
UBE3D-204ENST00000430071 PLXND1Q9Y4D7 1925 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 SLC9A3R1O14745 358 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-204ENST00000430071 ADH5P11766 374 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 HOXA6P31267 233 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 KDSRQ06136 332 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 SPEM2Q0P670 501 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 DMC1Q14565 340 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 FILIP1LQ4L180 1135 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 KLHDC7AQ5VTJ3 777 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 DDX42Q86XP3 938 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBE3D-204ENST00000430071 PHTF2Q8N3S3 785 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 CCDC33Q8N5R6 958 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 FAM124BQ9H5Z6 455 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-204ENST00000430071 PLCB1Q9NQ66 1216 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 CYLDQ9NQC7 956 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBE3D-204ENST00000430071 SH3BP1Q9Y3L3 701 aa17.8■□□□□ 0.44
UBE3D-204ENST00000430071 TNRC6BQ9UPQ9 1833 aaKnown RBP17.8■□□□□ 0.44
UBE3D-204ENST00000430071 RNF225M0QZC1 329 aaPredicted RBP17.79■□□□□ 0.44
UBE3D-204ENST00000430071 EPHB6O15197 1021 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 ID4P47928 161 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 YWHAEP62258 255 aaKnown RBP17.79■□□□□ 0.44
UBE3D-204ENST00000430071 NR1I3Q14994 352 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 FBXO43Q4G163 708 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 ARHGAP17Q68EM7 881 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 PIGZQ86VD9 579 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 TTC39CQ8N584 583 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 ZSWIM1Q9BR11 485 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 NACA2Q9H009 215 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 GANQ9H2C0 597 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 PNPLA8Q9NP80 782 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 FAM207AQ9NSI2 230 aaPredicted RBP17.79■□□□□ 0.44
UBE3D-204ENST00000430071 IFNKQ9P0W0 207 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 TBC1D14Q9P2M4 693 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 NAGPAQ9UK23 515 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 DNAJC12Q9UKB3 198 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 HCN2Q9UL51 889 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 FHOD1Q9Y613 1164 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 ATG13O75143 517 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 GABBR2O75899 941 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 ATP5C1P36542 298 aaKnown RBP17.79■□□□□ 0.44
UBE3D-204ENST00000430071 MFAP3P55082 362 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 UBASH3AP57075 661 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 PDE4CQ08493 712 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 ARHGAP44Q17R89 818 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 GOLGA7BQ2TAP0 167 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 RAB41Q5JT25 222 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 C10orf120Q5SQS8 335 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 HTR3DQ70Z44 454 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 ENOSF1Q7L5Y1 443 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 SYT13Q7L8C5 426 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 BHLHA9Q7RTU4 235 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 CCDC186Q7Z3E2 898 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 KBTBD6Q86V97 674 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 ETFBKMTQ8IXQ9 262 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 FAM160A2Q8N612 972 aaPredicted RBP17.79■□□□□ 0.44
UBE3D-204ENST00000430071 KIAA1958Q8N8K9 716 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 UBA3Q8TBC4 463 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 TFAP2BQ92481 460 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 NAA15Q9BXJ9 866 aaKnown RBP17.79■□□□□ 0.44
UBE3D-204ENST00000430071 INVSQ9Y283 1065 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 PCDHB4Q9Y5E5 795 aa17.79■□□□□ 0.44
UBE3D-204ENST00000430071 DCLK1O15075 740 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 KAT7O95251 611 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 KLKB1P03952 638 aa17.78■□□□□ 0.44
UBE3D-204ENST00000430071 UCHL3P15374 230 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms