RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 MSI1O43347 362 aaKnown RBP9.26□□□□□ -0.93
SMC6-204ENST00000428868 TGM5O43548 720 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 RNF8O76064 485 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 ENDOD1O94919 500 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 IGLV3-25P01717 112 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 FGGP02679 453 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 UQCRHP07919 91 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 GLI1P08151 1106 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 RALAP11233 206 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 HMGA1P17096 107 aaKnown RBP9.26□□□□□ -0.93
SMC6-204ENST00000428868 PCK1P35558 622 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 ARSEP51690 589 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 TWF1Q12792 350 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 SMARCB1Q12824 385 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 TAF10Q12962 218 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 NME3Q13232 169 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 PLD1Q13393 1074 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 TUBB2AQ13885 445 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 ERCC6LQ2NKX8 1250 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 SLC25A52Q3SY17 297 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 TEX35Q5T0J7 233 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 SEL1L2Q5TEA6 688 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 CCDC181Q5TID7 509 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 TPGS2Q68CL5 300 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 SPOCD1Q6ZMY3 1216 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 SLC13A5Q86YT5 568 aaPredicted RBP9.26□□□□□ -0.93
SMC6-204ENST00000428868 CCDC50Q8IVM0 306 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 PYROXD2Q8N2H3 581 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 CEP112Q8N8E3 955 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 MNS1Q8NEH6 495 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 SPATA4Q8NEY3 305 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 EXD1Q8NHP7 514 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 ACTRT1Q8TDG2 376 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 KCTD15Q96SI1 283 aaPredicted RBP9.26□□□□□ -0.93
SMC6-204ENST00000428868 FAM118BQ9BPY3 351 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 TUBB2BQ9BVA1 445 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 TTLL2Q9BWV7 592 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 HEMGNQ9BXL5 484 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 PLEKHA4Q9H4M7 779 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 ZNF334Q9HCZ1 680 aaPredicted RBP9.26□□□□□ -0.93
SMC6-204ENST00000428868 TLR9Q9NR96 1032 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 MTMR10Q9NXD2 777 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 SFMBT1Q9UHJ3 866 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 FBXW11Q9UKB1 542 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 R3HDM2Q9Y2K5 976 aaKnown RBP9.26□□□□□ -0.93
SMC6-204ENST00000428868 PCDHA11Q9Y5I1 949 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 INSL5Q9Y5Q6 135 aa9.26□□□□□ -0.93
SMC6-204ENST00000428868 DOCK8Q8NF50 2099 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 ANKRD36A6QL64 1941 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 COL6A3P12111 3177 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 hCG_1818297A0A087WSY0 165 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 LRRD1A4D1F6 860 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 CTAGE15A4D2H0 777 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 CARNS1A5YM72 827 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 CAPN9O14815 690 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 SART1O43290 800 aaKnown RBP9.25□□□□□ -0.93
SMC6-204ENST00000428868 PRPSAP2O60256 369 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 TBX18O95935 607 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 ZDHHC11BP0C7U3 371 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 CTAGE8P0CG41 777 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 KDELR1P24390 212 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 YWHAQP27348 245 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 GGCXP38435 758 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 CDKN2BP42772 138 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 ERVK-21P61565 698 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 RPL10AP62906 217 aaKnown RBP9.25□□□□□ -0.93
SMC6-204ENST00000428868 RBM10P98175 930 aaKnown RBP9.25□□□□□ -0.93
SMC6-204ENST00000428868 DEUP1Q05D60 604 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 CKAP4Q07065 602 aaKnown RBP9.25□□□□□ -0.93
SMC6-204ENST00000428868 GPM6BQ13491 265 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 SMC1AQ14683 1233 aaKnown RBP9.25□□□□□ -0.93
SMC6-204ENST00000428868 ACAP1Q15027 740 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 ELF2Q15723 593 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 LONRF2Q1L5Z9 754 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 FAM182AQ5T1J6 154 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 ZFYVE27Q5T4F4 411 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 LRRC38Q5VT99 294 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 BTBD8Q5XKL5 378 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 KAZNQ674X7 775 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 LILRA6Q6PI73 481 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 STRADAQ7RTN6 431 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 POLNQ7Z5Q5 900 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 ADGRD2Q7Z7M1 963 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 CTAGE6Q86UF2 777 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 CTAGE4Q8IX94 777 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 GDPD5Q8WTR4 605 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 TGS1Q96RS0 853 aaKnown RBP9.25□□□□□ -0.93
SMC6-204ENST00000428868 PLVAPQ9BX97 442 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 DDX47Q9H0S4 455 aaKnown RBP9.25□□□□□ -0.93
SMC6-204ENST00000428868 PRO3102Q9H379 93 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 CCSER2Q9H7U1 834 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 FAM204AQ9H8W3 233 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 PCDH18Q9HCL0 1135 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMC6-204ENST00000428868 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMC6-204ENST00000428868 LCMT1Q9UIC8 334 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 TTC7AQ9ULT0 858 aaPredicted RBP9.25□□□□□ -0.93
SMC6-204ENST00000428868 FZD10Q9ULW2 581 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 LZTS1Q9Y250 596 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms