RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 MAP7Q14244 749 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 SURF1Q15526 300 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 DUOXA2Q1HG44 320 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 NET1Q7Z628 596 aaPredicted RBP9.16□□□□□ -0.94
CDH13-202ENST00000428848 TRIM42Q8IWZ5 723 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 TAB3Q8N5C8 712 aaPredicted RBP9.16□□□□□ -0.94
CDH13-202ENST00000428848 SLC4A11Q8NBS3 891 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 FBXO27Q8NI29 283 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 CCDC110Q8TBZ0 833 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 SPATA18Q8TC71 538 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 APBB2Q92870 758 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 RTP4Q96DX8 246 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 MCRS1Q96EZ8 462 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 CPXM1Q96SM3 734 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 CCDC106Q9BWC9 280 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 ASCC2Q9H1I8 757 aaPredicted RBP9.16□□□□□ -0.94
CDH13-202ENST00000428848 RSAD1Q9HA92 442 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 USP29Q9HBJ7 922 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 METTL5Q9NRN9 209 aaKnown RBP9.16□□□□□ -0.94
CDH13-202ENST00000428848 DNAJB4Q9UDY4 337 aa9.16□□□□□ -0.94
CDH13-202ENST00000428848 CPSF3Q9UKF6 684 aaKnown RBP9.16□□□□□ -0.94
CDH13-202ENST00000428848 SCAF8Q9UPN6 1271 aaKnown RBP9.16□□□□□ -0.94
CDH13-202ENST00000428848 SSC5DA1L4H1 1573 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 CXorf49A8MYA2 514 aaPredicted RBP9.15□□□□□ -0.94
CDH13-202ENST00000428848 B2RBV5 119 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 TRIM49D1C9J1S8 452 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 TRDMT1O14717 391 aaKnown RBP9.15□□□□□ -0.94
CDH13-202ENST00000428848 SNNO75324 88 aaPredicted RBP9.15□□□□□ -0.94
CDH13-202ENST00000428848 TOM1L1O75674 476 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 TM7SF2O76062 418 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 ERBB2P04626 1255 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 SNRPAP09012 282 aaKnown RBP9.15□□□□□ -0.94
CDH13-202ENST00000428848 PSMC1P62191 440 aaKnown RBP9.15□□□□□ -0.94
CDH13-202ENST00000428848 CNTN2Q02246 1040 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 WDR78Q5VTH9 848 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 FAM160B1Q5W0V3 765 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 NME8Q8N427 588 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 EMC1Q8N766 993 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 KCTD6Q8NC69 237 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 RBM15BQ8NDT2 890 aaKnown RBP9.15□□□□□ -0.94
CDH13-202ENST00000428848 RAB3IL1Q8TBN0 382 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 DTX3LQ8TDB6 740 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 SLC7A3Q8WY07 619 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 HIC2Q96JB3 615 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 PEBP4Q96S96 227 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 PCYT2Q99447 389 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 ACO2Q99798 780 aaKnown RBP9.15□□□□□ -0.94
CDH13-202ENST00000428848 BCO2Q9BYV7 579 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 FRMD8Q9BZ67 464 aaPredicted RBP9.15□□□□□ -0.94
CDH13-202ENST00000428848 POPDC2Q9HBU9 364 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 SMYD2Q9NRG4 433 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 NRBP2Q9NSY0 501 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 ARMCX1Q9P291 453 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 ANGPTL2Q9UKU9 493 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 IKBKGQ9Y6K9 419 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 WASF2Q9Y6W5 498 aa9.15□□□□□ -0.94
CDH13-202ENST00000428848 SPDYE16A6NNV3 312 aaPredicted RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 OGTO15294 1046 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 ATP9BO43861 1147 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 ATP6V1G1O75348 118 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 PABPC4LP0CB38 370 aaKnown RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 TGFB3P10600 412 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 HARSP12081 509 aaKnown RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 ACTR3P61158 418 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 YWHAGP61981 247 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDH13-202ENST00000428848 ROR1Q01973 937 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 TRMT5Q32P41 509 aaKnown RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 NPNTQ6UXI9 565 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 MARK2Q7KZI7 788 aaKnown RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 ST13P4Q8IZP2 240 aaPredicted RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 PDCD7Q8N8D1 485 aaKnown RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDH13-202ENST00000428848 IRGQQ8WZA9 623 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 STMN2Q93045 179 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 E2F7Q96AV8 911 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 DCPSQ96C86 337 aaKnown RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 SDCBP2Q9H190 292 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 C1orf21Q9H246 121 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 NMRK2Q9NPI5 230 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 RNF181Q9P0P0 153 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 PCSK1NQ9UHG2 260 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 TAGLN3Q9UI15 199 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 USP18Q9UMW8 372 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 MED7O43513 233 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 AVILO75366 819 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 MAFO75444 373 aaPredicted RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 PROZP22891 400 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 MAGEA3P43357 314 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 CPA2P48052 419 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 DEUP1Q05D60 604 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 MMRN1Q13201 1228 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 TRPC3Q13507 836 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 TBCCQ15814 346 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 ZNF699Q32M78 642 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 ATG16L1Q676U5 607 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 KYAT3Q6YP21 454 aaKnown RBP9.14□□□□□ -0.95
CDH13-202ENST00000428848 ADGRG6Q86SQ4 1221 aa9.14□□□□□ -0.95
CDH13-202ENST00000428848 CAND1Q86VP6 1230 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms