RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TTKP33981 857 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 GCLMP48507 274 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 PDE1CQ14123 709 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-206ENST00000428313 ANKRD22Q5VYY1 191 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 C16orf86Q6ZW13 317 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 EEPD1Q7L9B9 569 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 SLC26A11Q86WA9 606 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 SLITRK1Q96PX8 696 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 IFT122Q9HBG6 1241 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 OLAHQ9NV23 265 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 RAB20Q9NX57 234 aa16.63■□□□□ 0.25
C9orf3-206ENST00000428313 PTBP2Q9UKA9 531 aaKnown RBP16.63■□□□□ 0.25
C9orf3-206ENST00000428313 COL4A1P02462 1669 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 A0A087WXM4 84 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 SGK1O00141 431 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 KPNA4O00629 521 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-206ENST00000428313 PPP1R11O60927 126 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-206ENST00000428313 SNRPAP09012 282 aaKnown RBP16.62■□□□□ 0.25
C9orf3-206ENST00000428313 COX4I1P13073 169 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 CDK8P49336 464 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 MXI1P50539 228 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 MRPS22P82650 360 aaKnown RBP16.62■□□□□ 0.25
C9orf3-206ENST00000428313 GAD2Q05329 585 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 C1orf220Q5T0J3 134 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 PDPK2PQ6A1A2 396 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 C1orf186Q6ZWK4 172 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 FAM178BQ8IXR5 827 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 TMEM102Q8N9M5 508 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-206ENST00000428313 OTUD5Q96G74 571 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 PKP2Q99959 881 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 APOL6Q9BWW8 343 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 CAAP1Q9H8G2 361 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 JMJD4Q9H9V9 463 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 PNPLA8Q9NP80 782 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 TCRBV9S1A1TA0A576 114 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 SNHG28P0DPA3 235 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
C9orf3-206ENST00000428313 CA8P35219 290 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 PCYT1AP49585 367 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 CTBSQ01459 385 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 FLOT2Q14254 428 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 NR1D2Q14995 579 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 BBS9Q3SYG4 887 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 EFCAB3Q8N7B9 438 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 RNF169Q8NCN4 708 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 TGFBRAP1Q8WUH2 860 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 RPGRQ92834 1020 aaKnown RBP16.62■□□□□ 0.25
C9orf3-206ENST00000428313 SLC4A9Q96Q91 983 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 WRNIP1Q96S55 665 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 RPF2Q9H7B2 306 aaKnown RBP16.62■□□□□ 0.25
C9orf3-206ENST00000428313 KLHL3Q9UH77 587 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 ERVK-11Q9UQG0 969 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 TIMM22Q9Y584 194 aa16.62■□□□□ 0.25
C9orf3-206ENST00000428313 CFAP99D6REC4 459 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 ATE1O95260 518 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 JAK1P23458 1154 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 LGSNQ5TDP6 509 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 PLA2G4FQ68DD2 849 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 KRT80Q6KB66 452 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 FRA10AC1Q70Z53 315 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 CYP2U1Q7Z449 544 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 DZIP1Q86YF9 867 aaKnown RBP16.61■□□□□ 0.25
C9orf3-206ENST00000428313 RDH13Q8NBN7 331 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 FAM20AQ96MK3 541 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 FERMT1Q9BQL6 677 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 KRBA1A5PL33 1030 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 KDM1AO60341 852 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 IFNB1P01574 187 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 KRT10P13645 584 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 DCKP27707 260 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 ECE1P42892 770 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 HNRNPFP52597 415 aaKnown RBP16.61■□□□□ 0.25
C9orf3-206ENST00000428313 KCNJ8Q15842 424 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 FSCBQ5H9T9 825 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 KRT39Q6A163 491 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 C16orf89Q6UX73 402 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 LYSMD3Q7Z3D4 306 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 TAMM41Q96BW9 452 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 ZNF778Q96MU6 729 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 STRA6Q9BX79 667 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 C10orf88Q9H8K7 445 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 DNAJC16Q9Y2G8 782 aa16.61■□□□□ 0.25
C9orf3-206ENST00000428313 ZNF335Q9H4Z2 1342 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-206ENST00000428313 FAM155AB1AL88 458 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-206ENST00000428313 H3BMQ9 156 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 GNPATO15228 680 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 MGEA5O60502 916 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 SERPINB2P05120 415 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 WEE2P0C1S8 567 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 HOXD11P31277 338 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-206ENST00000428313 CRHR1P34998 444 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 BMXP51813 675 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 TRPC3Q13507 836 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 ALCAMQ13740 583 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 CYP2A13Q16696 494 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 KAZNQ674X7 775 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 C12orf56Q8IXR9 622 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 FIBCD1Q8N539 461 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 SLC35B2Q8TB61 432 aa16.6■□□□□ 0.25
C9orf3-206ENST00000428313 COG8Q96MW5 612 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms