RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 MAP2K6P52564 334 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 HK3P52790 923 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 RHDQ02161 417 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 CUL4AQ13619 759 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 PROSER3Q2NL68 480 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 PPP4R3AQ6IN85 833 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 KRTAP5-11Q6L8G4 156 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 SLC4A10Q6U841 1118 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 PJA1Q8NG27 643 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 RUFY2Q8WXA3 655 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 CGRRF1Q99675 332 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 SMOQ99835 787 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 TPSD1Q9BZJ3 242 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 BHMT2Q9H2M3 363 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 LMBRD1Q9NUN5 540 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 DKK3Q9UBP4 350 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 L1RE1Q9UN81 338 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.74□□□□□ -1.49
LINC00458-202ENST00000427299 RFX7Q2KHR2 1363 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 CHD4Q14839 1912 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 TTC41PQ6P2S7 1318 aa5.74□□□□□ -1.49
LINC00458-202ENST00000427299 RGPD5Q99666 1765 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 A0A088AWK7 358 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 HIP1O00291 1037 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 TRIM38O00635 465 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 TPP1O14773 563 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 MYBP10242 640 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 PHKG2P15735 406 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 CERS1P27544 350 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 AMPHP49418 695 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 NDUFV1P49821 464 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 BRD3Q15059 726 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 CCDC183Q5T5S1 534 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 KSR2Q6VAB6 950 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 MCM10Q7L590 875 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 YTHDF3Q7Z739 585 aaKnown RBP5.73□□□□□ -1.49
LINC00458-202ENST00000427299 ERC1Q8IUD2 1116 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 AOPEPQ8N6M6 819 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 SVIPQ8NHG7 77 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 TTC17Q96AE7 1141 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 REPS1Q96D71 796 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 KIF1BPQ96EK5 621 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 AMBRA1Q9C0C7 1298 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 TSPY26PQ9H489 355 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 NRIP3Q9NQ35 241 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 CALCOCO1Q9P1Z2 691 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 STAP2Q9UGK3 403 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 NOL7Q9UMY1 257 aaKnown RBP5.73□□□□□ -1.49
LINC00458-202ENST00000427299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.73□□□□□ -1.49
LINC00458-202ENST00000427299 NUP188Q5SRE5 1749 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 DDX60Q8IY21 1712 aaKnown RBP5.73□□□□□ -1.49
LINC00458-202ENST00000427299 CCDC171Q6TFL3 1326 aa5.73□□□□□ -1.49
LINC00458-202ENST00000427299 CEMIPQ8WUJ3 1361 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 ANO9A1A5B4 782 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 FAM227AF5H4B4 570 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 F5H697 171 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 POLRMTO00411 1230 aaKnown RBP5.72□□□□□ -1.49
LINC00458-202ENST00000427299 TRIAP1O43715 76 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 RPLP2P05387 115 aaKnown RBP5.72□□□□□ -1.49
LINC00458-202ENST00000427299 PTMAP06454 111 aaKnown RBP5.72□□□□□ -1.49
LINC00458-202ENST00000427299 TPM3P06753 285 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 NHLRC4P0CG21 123 aaPredicted RBP5.72□□□□□ -1.49
LINC00458-202ENST00000427299 JUPP14923 745 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 HTR1BP28222 390 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 NKX6-1P78426 367 aaPredicted RBP5.72□□□□□ -1.49
LINC00458-202ENST00000427299 HMGN5P82970 282 aaKnown RBP5.72□□□□□ -1.49
LINC00458-202ENST00000427299 DCTN1Q14203 1278 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 ANO6Q4KMQ2 910 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 PLAC9Q5JTB6 97 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 THEMIS2Q5TEJ8 643 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 NPNTQ6UXI9 565 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 ZNF551Q7Z340 670 aaPredicted RBP5.72□□□□□ -1.49
LINC00458-202ENST00000427299 GAS2L3Q86XJ1 694 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 PDSS2Q86YH6 399 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 PLBD2Q8NHP8 589 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 SCAMP4Q969E2 229 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 RGMAQ96B86 450 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 CLPTM1LQ96KA5 538 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 ACTRT3Q9BYD9 372 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 SMOC2Q9H3U7 446 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 ETAA1Q9NY74 926 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 STXBP5LQ9Y2K9 1186 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 MYH3P11055 1940 aa5.72□□□□□ -1.49
LINC00458-202ENST00000427299 USP42Q9H9J4 1324 aaKnown RBP5.72□□□□□ -1.49
LINC00458-202ENST00000427299 PAPPAQ13219 1627 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 RPAP1Q9BWH6 1393 aaPredicted RBP5.71□□□□□ -1.5
LINC00458-202ENST00000427299 UBR2Q8IWV8 1755 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 TISP43B9A030 160 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 DYNC1I1O14576 645 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 ZNF213O14771 459 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 CHMLP26374 656 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 MPGP29372 298 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 NOGQ13253 232 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 BMPR2Q13873 1038 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 SUPT20HL1Q3ZLR7 823 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 LONRF3Q496Y0 759 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 SLC9A4Q6AI14 798 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 SWSAP1Q6NVH7 229 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 SASS6Q6UVJ0 657 aa5.71□□□□□ -1.5
LINC00458-202ENST00000427299 GADL1Q6ZQY3 521 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms