RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 SLC39A14Q15043 492 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 KARSQ15046 597 aaKnown RBP6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 CPSF6Q16630 551 aaKnown RBP eCLIP6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 USP41Q3LFD5 358 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 DCAF4L1Q3SXM0 396 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 FNDC3BQ53EP0 1204 aaKnown RBP6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 GTF2IRD2BQ6EKJ0 949 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 TMC5Q6UXY8 1006 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 USP49Q70CQ1 688 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 ZNF765Q7L2R6 523 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 TMC3Q7Z5M5 1100 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 GTF2IRD2Q86UP8 949 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 GPBP1Q86WP2 473 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 HSCBQ8IWL3 235 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 MFSD4AQ8N468 514 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 SLC44A3Q8N4M1 653 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 MYCT1Q8N699 235 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 SLC22A17Q8WUG5 538 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 RAD54LQ92698 747 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 NELL1Q92832 810 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 NINJ1Q92982 152 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 EPSTI1Q96J88 318 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 ZBTB45Q96K62 511 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 ACAP3Q96P50 834 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 PAAF1Q9BRP4 392 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 CCDC94Q9BW85 323 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 TARS2Q9BW92 718 aaKnown RBP6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 FAM126AQ9BYI3 521 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 PANK2Q9BZ23 570 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 CCSER1Q9C0I3 900 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 CXCL16Q9H2A7 254 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 PTPRHQ9HD43 1115 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 MARCH5Q9NX47 278 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 ARHGAP28Q9P2N2 729 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 CCDC39Q9UFE4 941 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 FBXO2Q9UK22 296 aaPredicted RBP6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 CAPN6Q9Y6Q1 641 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 PHLPP2Q6ZVD8 1323 aa6.71□□□□□ -1.34
NIF3L1-207ENST00000426253 TEP1Q99973 2627 aaKnown RBP6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 SMIM28A0A1B0GU29 152 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 KANSL1LA0AUZ9 987 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 CASTOR2A6NHX0 329 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 FAM170BA6NMN3 283 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 F8W810 466 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 H0YCG3 227 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 CLDN3O15551 220 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 PRODHO43272 600 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 TBX1O43435 398 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 HYAL3O43820 417 aaPredicted RBP6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 TOM1L1O75674 476 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 C1QL1O75973 258 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 RECQL4O94761 1208 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 KCNH1O95259 989 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 PRAMEF1O95521 474 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 EFEMP2O95967 443 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 CPP00450 1065 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 F13BP05160 661 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 SCG5P05408 212 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 URODP06132 367 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 GSNP06396 782 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 H2AFB2P0C5Z0 115 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 ITIH2P19823 946 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 GRIA2P42262 883 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 MATR3P43243 847 aaKnown RBP eCLIP6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 MASP1P48740 699 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 CLCN4P51793 760 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 STARD6P59095 220 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 SUMO1P63165 101 aaKnown RBP6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 POU4F1Q01851 419 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 DSG1Q02413 1049 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 PPP2R5DQ14738 602 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 NAB2Q15742 525 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 ZNF568Q3ZCX4 644 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 YOD1Q5VVQ6 348 aaPredicted RBP6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 RRAGBQ5VZM2 374 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 FUT10Q6P4F1 479 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 MPZL3Q6UWV2 235 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 HAUS6Q7Z4H7 955 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 FILIP1Q7Z7B0 1213 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 PALB2Q86YC2 1186 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 SHISA5Q8N114 240 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 TMEM161BQ8NDZ6 487 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 LARP4BQ92615 738 aaKnown RBP6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 B3GALT6Q96L58 329 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 ZNF396Q96N95 335 aaPredicted RBP6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 CLIC6Q96NY7 704 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 USP28Q96RU2 1077 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 HERC2P3Q9BVR0 1158 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 LGR4Q9BXB1 951 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 CDT1Q9H211 546 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 ZHX3Q9H4I2 956 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 PARVGQ9HBI0 331 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 RXFP1Q9HBX9 757 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 BLOC1S4Q9NUP1 217 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 CACNG4Q9UBN1 327 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 ADAM28Q9UKQ2 775 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 ODF2LQ9ULJ1 636 aa6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 MTF2Q9Y483 593 aaPredicted RBP6.7□□□□□ -1.34
NIF3L1-207ENST00000426253 NEUROG3Q9Y4Z2 214 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms