RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SLC12A6Q9UHW9 1150 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 FBXW11Q9UKB1 542 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 USP18Q9UMW8 372 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 MAGED2Q9UNF1 606 aaPredicted RBP10.78□□□□□ -0.68
MDC1-205ENST00000425072 NAALADL1Q9UQQ1 740 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 YIPF1Q9Y548 306 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 INSL5Q9Y5Q6 135 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 GBF1Q92538 1859 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 MUC3AQ02505 3323 aa10.78□□□□□ -0.68
MDC1-205ENST00000425072 A0A1W2PQH9 124 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 DDX3YO15523 660 aaKnown RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 CLASP2O75122 1294 aaKnown RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 SOAT2O75908 522 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 FYNP06241 537 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 C8AP07357 584 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 HNRNPA1P09651 372 aaKnown RBP eCLIP10.77□□□□□ -0.69
MDC1-205ENST00000425072 ZDHHC11BP0C7U3 371 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 SPATA31D3P0C874 917 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 RARGP13631 454 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 ATF6P18850 670 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 MIPP30301 263 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 HOXA9P31269 272 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 RDXP35241 583 aaKnown RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 ATP5C1P36542 298 aaKnown RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 GPR15P49685 360 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 SULT1E1P49888 294 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 CLCN4P51793 760 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 CKAP4Q07065 602 aaKnown RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 HECTD3Q5T447 861 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 SYPL2Q5VXT5 272 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 SPATA31D4Q6ZUB0 917 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 KATNAL2Q8IYT4 538 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 TTC9BQ8N6N2 239 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 CEP112Q8N8E3 955 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 LEMD2Q8NC56 503 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 KCTD6Q8NC69 237 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 CMASQ8NFW8 434 aaPredicted RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 EXD1Q8NHP7 514 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 SLC7A14Q8TBB6 771 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 GPR152Q8TDT2 470 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 SLC22A17Q8WUG5 538 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 TEKT4Q8WW24 435 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 RNF34Q969K3 372 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 MRPL38Q96DV4 380 aaKnown RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 RBM41Q96IZ5 413 aaKnown RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 PIWIL1Q96J94 861 aaKnown RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 RPGRIP1Q96KN7 1286 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 GOLPH3Q9H4A6 298 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 WDCPQ9H6R7 721 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 CERS4Q9HA82 394 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 PRDM16Q9HAZ2 1276 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.77□□□□□ -0.69
MDC1-205ENST00000425072 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.77□□□□□ -0.69
MDC1-205ENST00000425072 PCSK1NQ9UHG2 260 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 TTC7AQ9ULT0 858 aaPredicted RBP10.77□□□□□ -0.69
MDC1-205ENST00000425072 GREB1Q4ZG55 1949 aa10.77□□□□□ -0.69
MDC1-205ENST00000425072 SOBPA7XYQ1 873 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 NCK2O43639 380 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 CEP104O60308 925 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 XYLBO75191 536 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 LRCH4O75427 683 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 ZMYND10O75800 440 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 ARHGEF15O94989 841 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 HMGA1P17096 107 aaKnown RBP10.76□□□□□ -0.69
MDC1-205ENST00000425072 PFKLP17858 780 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 COL9A1P20849 921 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 IRS1P35568 1242 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 ZNF135P52742 658 aaPredicted RBP10.76□□□□□ -0.69
MDC1-205ENST00000425072 USP46P62068 366 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 AMPD2Q01433 879 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 ZNF252P-AS1Q0IIN9 211 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 PDK2Q15119 407 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 CDO1Q16878 200 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 C15orf59Q2T9L4 293 aaPredicted RBP10.76□□□□□ -0.69
MDC1-205ENST00000425072 LRIT3Q3SXY7 679 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 SEL1L2Q5TEA6 688 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 KLHDC10Q6PID8 442 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 HFE2Q6ZVN8 426 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 BHLHA9Q7RTU4 235 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 SCD5Q86SK9 330 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 ACTRT1Q8TDG2 376 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 EDEM1Q92611 657 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 SERPINB11Q96P15 392 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 MAK16Q9BXY0 300 aaKnown RBP10.76□□□□□ -0.69
MDC1-205ENST00000425072 PRO3102Q9H379 93 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 ZDHHC7Q9NXF8 308 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 ZMYM5Q9UJ78 669 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 PACSIN2Q9UNF0 486 aaPredicted RBP10.76□□□□□ -0.69
MDC1-205ENST00000425072 EFR3BQ9Y2G0 817 aa10.76□□□□□ -0.69
MDC1-205ENST00000425072 TMEM265A0A087WTH1 108 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 ZNF840PA6NDX5 716 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 MDM4O15151 490 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 POU2F2P09086 479 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 SRGAP2BP0DMP2 458 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 CDC25CP30307 473 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 CCR1P32246 355 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 CXCR5P32302 372 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 ADRA1BP35368 520 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 CXCR3P49682 368 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 TUBP50607 506 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms