RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 GAD2Q05329 585 aa10.56□□□□□ -0.72
VPS37A-202ENST00000425020 SH3PXD2AQ5TCZ1 1133 aa10.56□□□□□ -0.72
VPS37A-202ENST00000425020 OLFML2BQ68BL8 750 aa10.56□□□□□ -0.72
VPS37A-202ENST00000425020 PTAR1Q7Z6K3 402 aaPredicted RBP10.56□□□□□ -0.72
VPS37A-202ENST00000425020 ZSCAN18Q8TBC5 510 aaPredicted RBP10.56□□□□□ -0.72
VPS37A-202ENST00000425020 SCG3Q8WXD2 468 aaKnown RBP10.56□□□□□ -0.72
VPS37A-202ENST00000425020 EMID1Q96A84 441 aaPredicted RBP10.56□□□□□ -0.72
VPS37A-202ENST00000425020 OXNAD1Q96HP4 312 aaPredicted RBP10.56□□□□□ -0.72
VPS37A-202ENST00000425020 EGFL8Q99944 293 aa10.56□□□□□ -0.72
VPS37A-202ENST00000425020 APOBEC3GQ9HC16 384 aaKnown RBP10.56□□□□□ -0.72
VPS37A-202ENST00000425020 MYH6P13533 1939 aa10.56□□□□□ -0.72
VPS37A-202ENST00000425020 E5RI56 91 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 ACKR2O00590 384 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 TNPO2O14787 897 aaKnown RBP10.55□□□□□ -0.72
VPS37A-202ENST00000425020 POMCP01189 267 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 CPA3P15088 417 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 TSPAN8P19075 237 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 TAF6P49848 677 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 SERPINB9P50453 376 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 ZNF235Q14590 738 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 RARS2Q5T160 578 aaKnown RBP10.55□□□□□ -0.72
VPS37A-202ENST00000425020 FASTKD5Q7L8L6 764 aaKnown RBP10.55□□□□□ -0.72
VPS37A-202ENST00000425020 TRABD2AQ86V40 505 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 THEM5Q8N1Q8 247 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 REPS2Q8NFH8 660 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 BLOC1S5Q8TDH9 187 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 TFAP2BQ92481 460 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 CMTM5Q96DZ9 223 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 CATSPER2Q96P56 530 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 MTFR1LQ9H019 292 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 GOLGA2P5Q9HBQ8 144 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 NOCTQ9UK39 431 aaKnown RBP10.55□□□□□ -0.72
VPS37A-202ENST00000425020 APPL1Q9UKG1 709 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 hCG_1818297A0A087WSY0 165 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 SNX2O60749 519 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 SMNDC1O75940 238 aaKnown RBP eCLIP10.55□□□□□ -0.72
VPS37A-202ENST00000425020 HSPA8P11142 646 aaKnown RBP10.55□□□□□ -0.72
VPS37A-202ENST00000425020 GNAT1P11488 350 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 KCNA2P16389 499 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 TKTL1P51854 596 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 UBAP2LQ14157 1087 aaKnown RBP10.55□□□□□ -0.72
VPS37A-202ENST00000425020 CSHL1Q14406 222 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 FUT11Q495W5 492 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 GPRC5AQ8NFJ5 357 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 SPATA17Q96L03 361 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 CDT1Q9H211 546 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 XPNPEP1Q9NQW7 623 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 BATF3Q9NR55 127 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 NDFIP2Q9NV92 336 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 BARX2Q9UMQ3 279 aaPredicted RBP10.55□□□□□ -0.72
VPS37A-202ENST00000425020 KCPQ6ZWJ8 1503 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 TCRBV9S1A1TA0A576 114 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 APOC4-APOC2K7ER74 178 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 RNF103O00237 685 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 LSM8O95777 96 aaKnown RBP10.55□□□□□ -0.72
VPS37A-202ENST00000425020 APOC2P02655 101 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 SETSIPP0DME0 302 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 CALB2P22676 271 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 PTPN7P35236 360 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 PTGIRP43119 386 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 NOTUMQ6P988 496 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 MTHFD1LQ6UB35 978 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 FAM183BPQ6ZVS7 135 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 CMC1Q7Z7K0 106 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 ZNF518BQ9C0D4 1074 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 ZNF711Q9Y462 761 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 MROH7Q68CQ1 1323 aa10.55□□□□□ -0.72
VPS37A-202ENST00000425020 SPAG6O75602 509 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 DNAJC8O75937 253 aaPredicted RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 CHEK2O96017 543 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 S100BP04271 92 aaPredicted RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 GDF10P55107 478 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 VGLL4Q14135 290 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 DCAF4L1Q3SXM0 396 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 EFHC1Q5JVL4 640 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 MAP1SQ66K74 1059 aaPredicted RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 FRA10AC1Q70Z53 315 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 ZBTB46Q86UZ6 589 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 ANKRD13AQ8IZ07 590 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 ALLCQ8N6M5 410 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 SPDYE1Q8NFV5 336 aaPredicted RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 PGLYRP2Q96PD5 576 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 APBA2Q99767 749 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 SNRNP25Q9BV90 132 aaKnown RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 UBXN6Q9BZV1 441 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 TELO2Q9Y4R8 837 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 MAP1BP46821 2468 aaKnown RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 CLDN5O00501 218 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 C2CD2LO14523 706 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 VAPBO95292 243 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 PTDSS1P48651 473 aaKnown RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 TGFB2P61812 414 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 CAPRIN1Q14444 709 aaKnown RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 TAF1CQ15572 869 aaPredicted RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 FBXO47Q5MNV8 452 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 KCNV1Q6PIU1 500 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 CYP2R1Q6VVX0 501 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 SPATA2LQ8IUW3 424 aaPredicted RBP10.54□□□□□ -0.72
VPS37A-202ENST00000425020 SAMD3Q8N6K7 520 aa10.54□□□□□ -0.72
VPS37A-202ENST00000425020 STK32AQ8WU08 396 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms