RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 METTL25Q8N6Q8 603 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 GCNAQ96QF7 691 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 CALN1Q9BXU9 219 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 SHCBP1LQ9BZQ2 653 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 CYP4F11Q9HBI6 524 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 USP29Q9HBJ7 922 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 RAB6BQ9NRW1 208 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 CISHQ9NSE2 258 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 PCDHGB4Q9UN71 923 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 PCDHGB5Q9Y5G0 923 aa13.16□□□□□ -0.3
CTCFL-204ENST00000422869 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-204ENST00000422869 CAPN8A6NHC0 703 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 TRDMT1O14717 391 aaKnown RBP13.15□□□□□ -0.3
CTCFL-204ENST00000422869 TMCC1O94876 653 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 EDN1P05305 212 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 FAM200BP0CF97 657 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 SERPINB6P35237 376 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 NOMO1Q15155 1222 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 OGFRL1Q5TC84 451 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-204ENST00000422869 LGSNQ5TDP6 509 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 MROH9Q5TGP6 573 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 RBM44Q6ZP01 1051 aaKnown RBP13.15□□□□□ -0.3
CTCFL-204ENST00000422869 KBTBD6Q86V97 674 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 EFCAB3Q8N7B9 438 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 KLHL23Q8NBE8 558 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 PIP4K2CQ8TBX8 421 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 HSPH1Q92598 858 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 CCDC97Q96F63 343 aaPredicted RBP13.15□□□□□ -0.3
CTCFL-204ENST00000422869 SIKE1Q9BRV8 207 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 DNAJC16Q9Y2G8 782 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 TOM1L1O75674 476 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 KLHL2O95198 593 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 ATG7O95352 703 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 APOEP02649 317 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 ITGAXP20702 1163 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 YY1P25490 414 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 FDFT1P37268 417 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 RPS6P62753 249 aaKnown RBP13.15□□□□□ -0.3
CTCFL-204ENST00000422869 IRX4P78413 519 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 PEX6Q13608 980 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 VPS72Q15906 364 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 TEDDM1Q5T9Z0 273 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 DENND1BQ6P3S1 775 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 TRMT10BQ6PF06 316 aaKnown RBP13.15□□□□□ -0.3
CTCFL-204ENST00000422869 MCF2L2Q86YR7 1114 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 WDR75Q8IWA0 830 aaKnown RBP13.15□□□□□ -0.3
CTCFL-204ENST00000422869 MARVELD2Q8N4S9 558 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 CCDC33Q8N5R6 958 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 ICA1LQ8NDH6 482 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 FNIP1Q8TF40 1166 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 IMPG2Q9BZV3 1241 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 RBM38Q9H0Z9 239 aaKnown RBP13.15□□□□□ -0.3
CTCFL-204ENST00000422869 UBAP1Q9NZ09 502 aa13.15□□□□□ -0.3
CTCFL-204ENST00000422869 SLC15A5A6NIM6 579 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 KRT38O76015 456 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 FGF3P11487 239 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 MIPP30301 263 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 GRAMD1BQ3KR37 738 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 FASTKD1Q53R41 847 aaKnown RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 FAXCQ5TGI0 409 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 KLHDC10Q6PID8 442 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 UNC5AQ6ZN44 842 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 CPXCR1Q8N123 301 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 NLRP4Q96MN2 994 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 MSTO1Q9BUK6 570 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 STN1Q9H668 368 aaKnown RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 CYP26B1Q9NR63 512 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 SEPT9Q9UHD8 586 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 APOBEC2Q9Y235 224 aaKnown RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 SSX2IPQ9Y2D8 614 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 TCP10L2B9ZVM9 353 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 DENRO43583 198 aaKnown RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 OSBPP22059 807 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 RPL5P46777 297 aaKnown RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 HPCAP84074 193 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 C1QTNF12Q5T7M4 302 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 MFSD4BQ5TF39 518 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 ISLR2Q6UXK2 745 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 B3GNT6Q6ZMB0 384 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 RTKN2Q8IZC4 609 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 DEFB107AQ8IZN7 70 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 RDM1Q8NG50 284 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 TFB1MQ8WVM0 346 aaKnown RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 PDCD2LQ9BRP1 358 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 EMCNQ9ULC0 261 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 ADGRA2Q96PE1 1338 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 ZSCAN9O15535 394 aaPredicted RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 IMPDH2P12268 514 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 IDH3AP50213 366 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 NADK2Q4G0N4 442 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 WDR78Q5VTH9 848 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 FRMD7Q6ZUT3 714 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 FBXW8Q8N3Y1 598 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 PEBP4Q96S96 227 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 TARS2Q9BW92 718 aaKnown RBP13.14□□□□□ -0.31
CTCFL-204ENST00000422869 GMEB1Q9Y692 573 aa13.14□□□□□ -0.31
CTCFL-204ENST00000422869 FAM159BA6NKW6 160 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms