RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 PTPRHQ9HD43 1115 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 AMD1P17707 334 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 PMF1Q6P1K2 205 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 KIF2BQ8N4N8 673 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 TSPAN14Q8NG11 270 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 OPLAHO14841 1288 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 CDH16O75309 829 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 IFNA16P05015 189 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 ITGA8P53708 1063 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 SKP1P63208 163 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 SEZ6Q53EL9 994 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 TRAPPC11Q7Z392 1133 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 PTAR1Q7Z6K3 402 aaPredicted RBP13.94□□□□□ -0.18
COL20A1-203ENST00000422202 REXO5Q96IC2 774 aaKnown RBP13.94□□□□□ -0.18
COL20A1-203ENST00000422202 FAM20BO75063 409 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 SH3BGRLO75368 114 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 AGTP01019 485 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 PTPN3P26045 913 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 IL5RAQ01344 420 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 LTFP02788 710 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 UQCRBP14927 111 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 RAP1GAPP47736 663 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 VAC14Q08AM6 782 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 PROSER1Q86XN7 944 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 GUF1Q8N442 669 aaKnown RBP13.94□□□□□ -0.18
COL20A1-203ENST00000422202 NEK7Q8TDX7 302 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 CDK5RAP1Q96SZ6 601 aaKnown RBP13.94□□□□□ -0.18
COL20A1-203ENST00000422202 SLC2A4P14672 509 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 SP100P23497 879 aaPredicted RBP13.94□□□□□ -0.18
COL20A1-203ENST00000422202 NT5C2P49902 561 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 GALCP54803 685 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 STX5Q13190 355 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 SPPL2AQ8TCT8 520 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 UBE2OQ9C0C9 1292 aaKnown RBP13.94□□□□□ -0.18
COL20A1-203ENST00000422202 COMMD8Q9NX08 183 aa13.94□□□□□ -0.18
COL20A1-203ENST00000422202 PDXKO00764 312 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 HOXA2O43364 376 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 BOP1Q14137 746 aaKnown RBP13.93□□□□□ -0.18
COL20A1-203ENST00000422202 FAM171BQ6P995 826 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 C4orf22Q6V702 233 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 SPG21Q9NZD8 308 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 DUSP12Q9UNI6 340 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 PTPAQ15257 358 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 NR6A1Q15406 480 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 EPC2Q52LR7 807 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 SLC4A9Q96Q91 983 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 TBKBP1A7MCY6 615 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 PHF20L1A8MW92 1017 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 H3BMM5 538 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 VPS33AQ96AX1 596 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 EPS8L2Q9H6S3 715 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 KLHL3Q9UH77 587 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 DSEQ9UL01 958 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 CNTNAP2Q9UHC6 1331 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 ITGALP20701 1170 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 LLGL2Q6P1M3 1020 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 STRA8Q7Z7C7 330 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 FIG4Q92562 907 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 TMEM39BQ9GZU3 492 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 RHBDL2Q9NX52 303 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 UBP1Q9NZI7 540 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 LYVE1Q9Y5Y7 322 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 CITO14578 2027 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 PDS5AQ29RF7 1337 aaKnown RBP13.93□□□□□ -0.18
COL20A1-203ENST00000422202 ANO9A1A5B4 782 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 ZNF286BP0CG31 522 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 RPL10AP62906 217 aaKnown RBP13.93□□□□□ -0.18
COL20A1-203ENST00000422202 ITGADQ13349 1161 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 RSBN1Q5VWQ0 802 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-203ENST00000422202 SLC30A9Q6PML9 568 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 TRPM8Q7Z2W7 1104 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 CHPFQ8IZ52 775 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 ZNF473Q8WTR7 871 aaKnown RBP13.93□□□□□ -0.18
COL20A1-203ENST00000422202 EPC1Q9H2F5 836 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 ACTR8Q9H981 624 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 SPAG6O75602 509 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 KYNUQ16719 465 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 TMEM26Q6ZUK4 368 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 AGGF1Q8N302 714 aaeCLIP13.93□□□□□ -0.18
COL20A1-203ENST00000422202 DPY30Q9C005 99 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 C6orf62Q9GZU0 229 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-203ENST00000422202 ZMYM5Q9UJ78 669 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 VAV3Q9UKW4 847 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 ENTPD4Q9Y227 616 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 CROCC2H7BZ55 1655 aa13.93□□□□□ -0.18
COL20A1-203ENST00000422202 WARSP23381 471 aaKnown RBP13.92□□□□□ -0.18
COL20A1-203ENST00000422202 MRPS35P82673 323 aaKnown RBP13.92□□□□□ -0.18
COL20A1-203ENST00000422202 TDRD5Q8NAT2 981 aaKnown RBP13.92□□□□□ -0.18
COL20A1-203ENST00000422202 ZNF671Q8TAW3 534 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 GMCL1Q96IK5 515 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 ZNF112Q9UJU3 913 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 ZNF232Q9UNY5 417 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 MDH1P40925 334 aaKnown RBP13.92□□□□□ -0.18
COL20A1-203ENST00000422202 KBTBD12Q3ZCT8 623 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 MTMR12Q9C0I1 747 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 MAPKBP1O60336 1514 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 CLK3P49761 638 aaKnown RBP13.92□□□□□ -0.18
COL20A1-203ENST00000422202 NANOGNBQ7Z5D8 188 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 VPS51Q9UID3 782 aa13.92□□□□□ -0.18
COL20A1-203ENST00000422202 CLASP1Q7Z460 1538 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms