RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 MAP3K6O95382 1288 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 RAG1P15918 1043 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 SERPINB6P35237 376 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 TTLL12Q14166 644 aaPredicted RBP22.03■■□□□ 1.12
USP48-205ENST00000421625 TCHHL1Q5QJ38 904 aaPredicted RBP22.03■■□□□ 1.12
USP48-205ENST00000421625 LGSNQ5TDP6 509 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 RSPH3Q86UC2 560 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 RDM1Q8NG50 284 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 PPP1R14CQ8TAE6 165 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 HIC2Q96JB3 615 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 MPP4Q96JB8 637 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 PEBP4Q96S96 227 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 PREBQ9HCU5 417 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 MKS1Q9NXB0 559 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 CDH22Q9UJ99 828 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 PCDHGC3Q9UN70 934 aa22.03■■□□□ 1.12
USP48-205ENST00000421625 OSBPP22059 807 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 COPAP53621 1224 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 TGFB2P61812 414 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.02■■□□□ 1.12
USP48-205ENST00000421625 JDP2Q8WYK2 163 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 CPXM1Q96SM3 734 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 ZNF277Q9NRM2 450 aaPredicted RBP22.02■■□□□ 1.12
USP48-205ENST00000421625 G3BP2Q9UN86 482 aaKnown RBP22.02■■□□□ 1.12
USP48-205ENST00000421625 TTLL13PA6NNM8 815 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 CRHR1P34998 444 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 FASTKD1Q53R41 847 aaKnown RBP22.02■■□□□ 1.12
USP48-205ENST00000421625 UGT2A3Q6UWM9 527 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 UNC5AQ6ZN44 842 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 HPS6Q86YV9 775 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 NIF3L1Q9GZT8 377 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 TMEM39BQ9GZU3 492 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 USP18Q9UMW8 372 aa22.02■■□□□ 1.12
USP48-205ENST00000421625 KCNN4O15554 427 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 SIN3BO75182 1162 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 KRT38O76015 456 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 ATG7O95352 703 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 TRUB2O95900 331 aaKnown RBP22.02■■□□□ 1.11
USP48-205ENST00000421625 APOEP02649 317 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 CD19P15391 556 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 CHN2P52757 468 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 RPL10AP62906 217 aaKnown RBP22.02■■□□□ 1.11
USP48-205ENST00000421625 ORC1Q13415 861 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 SH3PXD2AQ5TCZ1 1133 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 SLFN12LQ6IEE8 588 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 PGM2L1Q6PCE3 622 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 DEPTORQ8TB45 409 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 DNAJC1Q96KC8 554 aaKnown RBP22.02■■□□□ 1.11
USP48-205ENST00000421625 MIS12Q9H081 205 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 USP29Q9HBJ7 922 aa22.02■■□□□ 1.11
USP48-205ENST00000421625 ADGRA2Q96PE1 1338 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 LDHAP00338 332 aaKnown RBP22.01■■□□□ 1.11
USP48-205ENST00000421625 GSRP00390 522 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 APRTP07741 180 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 SMIM18P0DKX4 95 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 ANKRD20A4Q4UJ75 823 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 ATG14Q6ZNE5 492 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 MAVSQ7Z434 540 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 WDR75Q8IWA0 830 aaKnown RBP22.01■■□□□ 1.11
USP48-205ENST00000421625 RAB3IL1Q8TBN0 382 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 POMPQ9Y244 141 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 CNTNAP1P78357 1384 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 C15orf38-AP3S2A0A0A6YYH1 394 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 SLC15A5A6NIM6 579 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 BIRC5O15392 142 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 ASLP04424 464 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 ERBB2P04626 1255 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 ATP5BP06576 529 aaKnown RBP22.01■■□□□ 1.11
USP48-205ENST00000421625 PSAPP07602 524 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 L1CAMP32004 1257 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 CDH6P55285 790 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 FOLH1Q04609 750 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 GRAMD1BQ3KR37 738 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 ARPINQ7Z6K5 226 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 SDCCAG8Q86SQ7 713 aaPredicted RBP22.01■■□□□ 1.11
USP48-205ENST00000421625 PIWIL2Q8TC59 973 aaKnown RBP22.01■■□□□ 1.11
USP48-205ENST00000421625 FAM151AQ8WW52 585 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 GCNAQ96QF7 691 aa22.01■■□□□ 1.11
USP48-205ENST00000421625 SF3B1O75533 1304 aaKnown RBP eCLIP22.01■■□□□ 1.117e-6■■■■■ 44.5
USP48-205ENST00000421625 ZMPSTE24O75844 475 aa22■■□□□ 1.11
USP48-205ENST00000421625 KCNA2P16389 499 aa22■■□□□ 1.11
USP48-205ENST00000421625 USP46P62068 366 aa22■■□□□ 1.11
USP48-205ENST00000421625 R3HDM1Q15032 1099 aaKnown RBP22■■□□□ 1.11
USP48-205ENST00000421625 TEDDM1Q5T9Z0 273 aa22■■□□□ 1.11
USP48-205ENST00000421625 ZBTB33Q86T24 672 aa22■■□□□ 1.11
USP48-205ENST00000421625 XYLT1Q86Y38 959 aa22■■□□□ 1.11
USP48-205ENST00000421625 MPP5Q8N3R9 675 aa22■■□□□ 1.11
USP48-205ENST00000421625 FNIP1Q8TF40 1166 aa22■■□□□ 1.11
USP48-205ENST00000421625 RSAD1Q9HA92 442 aa22■■□□□ 1.11
USP48-205ENST00000421625 SLC38A10Q9HBR0 1119 aa22■■□□□ 1.11
USP48-205ENST00000421625 STAU2Q9NUL3 570 aaKnown RBP eCLIP22■■□□□ 1.11
USP48-205ENST00000421625 ZNF70Q9UC06 446 aaPredicted RBP22■■□□□ 1.11
USP48-205ENST00000421625 SORCS3Q9UPU3 1222 aa22■■□□□ 1.11
USP48-205ENST00000421625 APOBEC2Q9Y235 224 aaKnown RBP22■■□□□ 1.11
USP48-205ENST00000421625 TRDMT1O14717 391 aaKnown RBP22■■□□□ 1.11
USP48-205ENST00000421625 PENKP01210 267 aaPredicted RBP22■■□□□ 1.11
USP48-205ENST00000421625 PIGRP01833 764 aa22■■□□□ 1.11
USP48-205ENST00000421625 KCNA4P22459 653 aa22■■□□□ 1.11
USP48-205ENST00000421625 POLR2BP30876 1174 aaKnown RBP22■■□□□ 1.11
USP48-205ENST00000421625 MBLAC2Q68D91 279 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms