RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 METTL18O95568 372 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 CD4P01730 458 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 ADRA1DP25100 572 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 ELF3P78545 371 aaPredicted RBP16.8■□□□□ 0.28
CTSB-203ENST00000420692 PYROXD2Q8N2H3 581 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 CCDC63Q8NA47 563 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 SLC44A1Q8WWI5 657 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 SERAC1Q96JX3 654 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 CYTH2Q99418 400 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 DHX35Q9H5Z1 703 aaKnown RBP16.8■□□□□ 0.28
CTSB-203ENST00000420692 SLC17A7Q9P2U7 560 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 GTF2IRD1Q9UHL9 959 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 TTLL3Q9Y4R7 772 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 NR2E3Q9Y5X4 410 aa16.8■□□□□ 0.28
CTSB-203ENST00000420692 EDF1O60869 148 aaKnown RBP16.79■□□□□ 0.28
CTSB-203ENST00000420692 ZBED1O96006 694 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 AXLP30530 894 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
CTSB-203ENST00000420692 PITX1P78337 314 aaPredicted RBP16.79■□□□□ 0.28
CTSB-203ENST00000420692 FAAP100Q0VG06 881 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 MAP2K5Q13163 448 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 OTUD1Q5VV17 481 aaPredicted RBP16.79■□□□□ 0.28
CTSB-203ENST00000420692 ZNF534Q76KX8 674 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 ARCQ7LC44 396 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 TCP10LQ8TDR4 215 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 ZNF75CPQ92670 426 aaPredicted RBP16.79■□□□□ 0.28
CTSB-203ENST00000420692 GRAMD1AQ96CP6 724 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 POPDC2Q9HBU9 364 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 RXFP1Q9HBX9 757 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 IPPQ9Y573 584 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 USP3Q9Y6I4 520 aa16.79■□□□□ 0.28
CTSB-203ENST00000420692 CXorf49A8MYA2 514 aaPredicted RBP16.78■□□□□ 0.28
CTSB-203ENST00000420692 MGRN1O60291 552 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 FAM155BO75949 473 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 BEST1O76090 585 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 LILRA4P59901 499 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 PAQR9Q6ZVX9 377 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 CSPG4P5Q96PW8 444 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 TRIM56Q9BRZ2 755 aaKnown RBP16.78■□□□□ 0.28
CTSB-203ENST00000420692 ECT2Q9H8V3 914 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 AP4E1Q9UPM8 1137 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 MYO18AQ92614 2054 aaKnown RBP16.78■□□□□ 0.28
CTSB-203ENST00000420692 CFAP69A5D8W1 941 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 DCAF8L1A6NGE4 600 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 PTGESO14684 152 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 HGSO14964 777 aaPredicted RBP16.78■□□□□ 0.28
CTSB-203ENST00000420692 SCNN1AP37088 669 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 YWHAGP61981 247 aaKnown RBP eCLIP16.78■□□□□ 0.28
CTSB-203ENST00000420692 KCNJ2P63252 427 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 FKBP1BP68106 108 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 PARP9Q8IXQ6 854 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 SNX25Q9H3E2 840 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 PNPLA8Q9NP80 782 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 CYLDQ9NQC7 956 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 TMPRSS4Q9NRS4 437 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
CTSB-203ENST00000420692 MEIS3P2A8K0S8 358 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 CLDN5O00501 218 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 ZWINTO95229 277 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 CELF2O95319 508 aaKnown RBP16.77■□□□□ 0.28
CTSB-203ENST00000420692 APRTP07741 180 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 AMPD1P23109 780 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 MAGEA3P43357 314 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 TAF6P49848 677 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 HHATQ5VTY9 493 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 KIAA0319Q5VV43 1072 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 TBC1D1Q86TI0 1168 aaPredicted RBP16.77■□□□□ 0.28
CTSB-203ENST00000420692 PIGZQ86VD9 579 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 APPL2Q8NEU8 664 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 CFAP36Q96G28 342 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 HSFY1Q96LI6 401 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 SMYD2Q9NRG4 433 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 KLHL14Q9P2G3 628 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 TRIM33Q9UPN9 1127 aa16.77■□□□□ 0.28
CTSB-203ENST00000420692 IGF2BP3O00425 579 aaKnown RBP eCLIP16.77■□□□□ 0.274e-7■■□□□ 11.8
CTSB-203ENST00000420692 GCATO75600 419 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 MYL3P08590 195 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 SNX16P57768 344 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 PTK7Q13308 1070 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 SLC45A4Q5BKX6 768 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 NCBP2-AS2Q69YL0 99 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 KCNT2Q6UVM3 1135 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 OTOAQ7RTW8 1153 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 ADGRF2Q8IZF7 708 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 NETO2Q8NC67 525 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 CD248Q9HCU0 757 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.77■□□□□ 0.27
CTSB-203ENST00000420692 DTLQ9NZJ0 730 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 CHKBQ9Y259 395 aa16.77■□□□□ 0.27
CTSB-203ENST00000420692 WDR91A4D1P6 747 aa16.76■□□□□ 0.27
CTSB-203ENST00000420692 GOT1P17174 413 aa16.76■□□□□ 0.27
CTSB-203ENST00000420692 ACAT1P24752 427 aaKnown RBP16.76■□□□□ 0.27
CTSB-203ENST00000420692 HOXC8P31273 242 aa16.76■□□□□ 0.27
CTSB-203ENST00000420692 GRIA1P42261 906 aa16.76■□□□□ 0.27
CTSB-203ENST00000420692 NDUFV1P49821 464 aa16.76■□□□□ 0.27
CTSB-203ENST00000420692 CRYBB1P53674 252 aaPredicted RBP16.76■□□□□ 0.27
CTSB-203ENST00000420692 SLC18A2Q05940 514 aa16.76■□□□□ 0.27
CTSB-203ENST00000420692 ICE2Q659A1 982 aa16.76■□□□□ 0.27
CTSB-203ENST00000420692 DEFB106AQ8N104 65 aa16.76■□□□□ 0.27
CTSB-203ENST00000420692 B3GALNT2Q8NCR0 500 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms