RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 OAZ2O95190 189 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 PROCP04070 461 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 MYL1P05976 194 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 HNRNPA1P09651 372 aaKnown RBP eCLIP7.45□□□□□ -1.22
HMGN1-205ENST00000419378 H2AFB1P0C5Y9 115 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 H2AFB2P0C5Z0 115 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 FSTP19883 344 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 PAX3P23760 479 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 HOXA9P31269 272 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 LILRA4P59901 499 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 CYP27A1Q02318 531 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 YWHAHQ04917 246 aaPredicted RBP7.45□□□□□ -1.22
HMGN1-205ENST00000419378 PTPN21Q16825 1174 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 BMT2Q1RMZ1 405 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 CTXN3Q4LDR2 81 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 ANKRD39Q53RE8 183 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 PPM1LQ5SGD2 360 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 CBWD2Q8IUF1 395 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 NELFCDQ8IXH7 590 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 GPD1LQ8N335 351 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 KIAA0895Q8NCT3 520 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 SLC7A14Q8TBB6 771 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 SHKBP1Q8TBC3 707 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 FAM84AQ96KN4 292 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 Q96M66 194 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 SPOCK3Q9BQ16 436 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 PDE11AQ9HCR9 933 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 WDR6Q9NNW5 1121 aaKnown RBP7.45□□□□□ -1.22
HMGN1-205ENST00000419378 SLC39A2Q9NP94 309 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 EXOC1Q9NV70 894 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 DPP3Q9NY33 737 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 HSPBP1Q9NZL4 362 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 ZMYM5Q9UJ78 669 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 TIMM13Q9Y5L4 95 aaPredicted RBP7.45□□□□□ -1.22
HMGN1-205ENST00000419378 SCN1AP35498 2009 aa7.45□□□□□ -1.22
HMGN1-205ENST00000419378 TECTAO75443 2155 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 PRRG1O14668 218 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 CLIC2O15247 247 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 N4BP1O75113 896 aaKnown RBP7.44□□□□□ -1.22
HMGN1-205ENST00000419378 ABLIM3O94929 683 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 POU2F2P09086 479 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 OR4Q2P0C623 313 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 ODC1P11926 461 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 ATF2P15336 505 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 TYMPP19971 482 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 CD247P20963 164 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 TAF6P49848 677 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 CYP2J2P51589 502 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 ARPP19P56211 112 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 SNRPFP62306 86 aaKnown RBP7.44□□□□□ -1.22
HMGN1-205ENST00000419378 TFAMQ00059 246 aaKnown RBP7.44□□□□□ -1.22
HMGN1-205ENST00000419378 STK4Q13043 487 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 SNW1Q13573 536 aaKnown RBP7.44□□□□□ -1.22
HMGN1-205ENST00000419378 TCEAL1Q15170 157 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 SNRNP35Q16560 246 aaKnown RBP7.44□□□□□ -1.22
HMGN1-205ENST00000419378 RSPO4Q2I0M5 234 aaPredicted RBP7.44□□□□□ -1.22
HMGN1-205ENST00000419378 SV2CQ496J9 727 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 TMEM31Q5JXX7 168 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 KRBA2Q6ZNG9 492 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 GET4Q7L5D6 327 aaPredicted RBP7.44□□□□□ -1.22
HMGN1-205ENST00000419378 OTOP3Q7RTS5 596 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 ADAT2Q7Z6V5 191 aaKnown RBP7.44□□□□□ -1.22
HMGN1-205ENST00000419378 ZDHHC14Q8IZN3 488 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 DTWD2Q8NBA8 298 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF461Q8TAF7 563 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 COX4I2Q96KJ9 171 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 SENP8Q96LD8 212 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF560Q96MR9 790 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 LRFN3Q9BTN0 628 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 MTMR12Q9C0I1 747 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 PRDM14Q9GZV8 571 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 GP6Q9HCN6 339 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 APEX2Q9UBZ4 518 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 PTPRJQ12913 1337 aa7.44□□□□□ -1.22
HMGN1-205ENST00000419378 DOCK8Q8NF50 2099 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ARHGEF37A1IGU5 675 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF233A6NK53 670 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 OR6C75A6NL08 312 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 MSTNO14793 375 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF202O95125 648 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 SEC24AO95486 1093 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 IGLV1-40P01703 118 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 LRG1P02750 347 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 RPN1P04843 607 aaKnown RBP7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ITGB3P05106 788 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ASGR2P07307 311 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 TMEM191BP0C7N4 346 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 NAT2P11245 290 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ELF1P32519 619 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 PNPLA4P41247 253 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 KIR3DL1P43629 444 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF143P52747 638 aaPredicted RBP7.43□□□□□ -1.22
HMGN1-205ENST00000419378 NTHL1P78549 312 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ZXDAP98168 799 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ADCY1Q08828 1119 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 KNOP1Q1ED39 458 aaKnown RBP7.43□□□□□ -1.22
HMGN1-205ENST00000419378 NKAPLQ5M9Q1 402 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 TPGS2Q68CL5 300 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 LMBRD2Q68DH5 695 aaPredicted RBP7.43□□□□□ -1.22
HMGN1-205ENST00000419378 RTL10Q7L3V2 364 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms