RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 NOL3O60936 208 aaKnown RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 DLDP09622 509 aaKnown RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 FAM58BPP0C7Q3 252 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 CDK4P11802 303 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 EEF1B2P24534 225 aaKnown RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 CDH8P55286 799 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 CDH15P55291 814 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 KATNAL2Q8IYT4 538 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 OR5B17Q8NGF7 314 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 OLIG1Q8TAK6 271 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 DIS3LQ8TF46 1054 aaKnown RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 MOCOSQ96EN8 888 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 MARK4Q96L34 752 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 ZNF341Q9BYN7 854 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 PCDH9Q9HC56 1237 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 TRNAU1APQ9NX07 287 aaKnown RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 SLIT2O94813 1529 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 WNK3Q9BYP7 1800 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 MAGEB2O15479 319 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 NFKBIAP25963 317 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 KLRC2P26717 231 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 TYK2P29597 1187 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 ART3Q13508 389 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 TLR1Q15399 786 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 FASTKD1Q53R41 847 aaKnown RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 FASTKD5Q7L8L6 764 aaKnown RBP12.1□□□□□ -0.47
DDR1-232ENST00000418800 PDSS2Q86YH6 399 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 FAM156AQ8NDB6 213 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 WRNIP1Q96S55 665 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 RNPEPQ9H4A4 650 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 ACSS3Q9H6R3 686 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 PNPOQ9NVS9 261 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 FBXO40Q9UH90 709 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 PCDHGB4Q9UN71 923 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 SHOC2Q9UQ13 582 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 ZNF510Q9Y2H8 683 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 PCDHGB5Q9Y5G0 923 aa12.1□□□□□ -0.47
DDR1-232ENST00000418800 OCM2P0CE71 109 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 OCMP0CE72 109 aaPredicted RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 IL1R1P14778 569 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 HADHBP55084 474 aaKnown RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 BCAR1P56945 870 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 PLEKHA7Q6IQ23 1121 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 NCCRP1Q6ZVX7 275 aaPredicted RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 TMEM110Q86TL2 294 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 UNC5BQ8IZJ1 945 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 BANPQ8N9N5 519 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 GABPB2Q8TAK5 448 aaPredicted RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 BSNDQ8WZ55 320 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 NUB1Q9Y5A7 615 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 CXorf49A8MYA2 514 aaPredicted RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 TNFAIP8O95379 198 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 PSMC3P17980 439 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 CRABP2P29373 138 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 POLR2BP30876 1174 aaKnown RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 GJA8P48165 433 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 NOMO3P69849 1222 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 ITGA9Q13797 1035 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 ZNF786Q8N393 782 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 C7orf31Q8N865 590 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 JOSD2Q8TAC2 188 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 SKA1Q96BD8 255 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 MTMR12Q9C0I1 747 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 NDEL1Q9GZM8 345 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 BRD8Q9H0E9 1235 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 USP29Q9HBJ7 922 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 DNAH12Q6ZR08 3092 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 MYPNQ86TC9 1320 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 PRPSAP2O60256 369 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 KDM1AO60341 852 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 PENKP01210 267 aaPredicted RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 ABHD2P08910 425 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 OSBPP22059 807 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 GTF2A2P52657 109 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 SLC5A3P53794 718 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 MYL6P60660 151 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 TTC39BQ5VTQ0 682 aaPredicted RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 TDRD10Q5VZ19 366 aaKnown RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 SLC26A11Q86WA9 606 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 TMIGD2Q96BF3 282 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 PRMT6Q96LA8 375 aaPredicted RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 HEXIM2Q96MH2 286 aaKnown RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 ADPGKQ9BRR6 497 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 FOXP3Q9BZS1 431 aa12.09□□□□□ -0.47
DDR1-232ENST00000418800 GNEQ9Y223 722 aaKnown RBP12.09□□□□□ -0.47
DDR1-232ENST00000418800 F8W8V4 182 aa12.08□□□□□ -0.48
DDR1-232ENST00000418800 MAGEC1O60732 1142 aa12.08□□□□□ -0.48
DDR1-232ENST00000418800 MT-CO1P00395 513 aa12.08□□□□□ -0.48
DDR1-232ENST00000418800 CALB1P05937 261 aa12.08□□□□□ -0.48
DDR1-232ENST00000418800 MCF2P10911 925 aa12.08□□□□□ -0.48
DDR1-232ENST00000418800 UNGP13051 313 aaPredicted RBP12.08□□□□□ -0.48
DDR1-232ENST00000418800 GPC3P51654 580 aa12.08□□□□□ -0.48
DDR1-232ENST00000418800 DPYSL3Q14195 570 aa12.08□□□□□ -0.48
DDR1-232ENST00000418800 TKFCQ3LXA3 575 aa12.08□□□□□ -0.48
DDR1-232ENST00000418800 TMC7Q7Z402 723 aa12.08□□□□□ -0.48
DDR1-232ENST00000418800 ZNF398Q8TD17 642 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 492.3 ms