RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TNFRSF4P43489 277 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 NUCB2P80303 420 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 LRMPQ12912 555 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 GOLGA7BQ2TAP0 167 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 IL31Q6EBC2 164 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 CCDC186Q7Z3E2 898 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 PIGZQ86VD9 579 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 FRMD1Q8N878 549 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 ZNF513Q8N8E2 541 aaPredicted RBP16.35■□□□□ 0.21
ACTB-202ENST00000414620 DUSP9Q99956 384 aaKnown RBP16.35■□□□□ 0.21
ACTB-202ENST00000414620 VPS45Q9NRW7 570 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 DNMT3LQ9UJW3 386 aa16.35■□□□□ 0.21
ACTB-202ENST00000414620 A0A0A0MRY4 1105 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 TULP2O00295 520 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 CAVIN2O95810 425 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 RALAP11233 206 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 PLA2G4AP47712 749 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 DHPSP49366 369 aaPredicted RBP16.34■□□□□ 0.21
ACTB-202ENST00000414620 MCCD1P59942 119 aaPredicted RBP16.34■□□□□ 0.21
ACTB-202ENST00000414620 FKBP3Q00688 224 aaKnown RBP16.34■□□□□ 0.21
ACTB-202ENST00000414620 EFEMP1Q12805 493 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 HSF5Q4G112 596 aaPredicted RBP16.34■□□□□ 0.21
ACTB-202ENST00000414620 COBLL1Q53SF7 1204 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 EGFLAMQ63HQ2 1017 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 TOGARAM2Q6ZUX3 1019 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 ARMCX6Q7L4S7 300 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 ZC3H3Q8IXZ2 948 aaKnown RBP16.34■□□□□ 0.21
ACTB-202ENST00000414620 NDRG1Q92597 394 aaKnown RBP16.34■□□□□ 0.21
ACTB-202ENST00000414620 XPO6Q96QU8 1125 aaKnown RBP16.34■□□□□ 0.21
ACTB-202ENST00000414620 PLK2Q9NYY3 685 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 HCN2Q9UL51 889 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 USP3Q9Y6I4 520 aa16.34■□□□□ 0.21
ACTB-202ENST00000414620 PI4KAP42356 2102 aa16.33■□□□□ 0.21
ACTB-202ENST00000414620 BCLAF3A2AJT9 711 aaKnown RBP16.33■□□□□ 0.2
ACTB-202ENST00000414620 CACNG3O60359 315 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 STC2O76061 302 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 HOXB2P14652 356 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 CD44P16070 742 aaKnown RBP16.33■□□□□ 0.2
ACTB-202ENST00000414620 PSEN1P49768 467 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 CUL2Q13617 745 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 PREPLQ4J6C6 727 aaPredicted RBP16.33■□□□□ 0.2
ACTB-202ENST00000414620 STPG1Q5TH74 334 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 RNF43Q68DV7 783 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 KLHL10Q6JEL2 608 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 KLHDC10Q6PID8 442 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 Q6ZNB5 142 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 CYP2U1Q7Z449 544 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 TADA2BQ86TJ2 420 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 TTC39CQ8N584 583 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 OLIG1Q8TAK6 271 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 ACOX2Q99424 681 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 EDEM2Q9BV94 578 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 ARMCX3Q9UH62 379 aaPredicted RBP16.33■□□□□ 0.2
ACTB-202ENST00000414620 MAN1B1Q9UKM7 699 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 TSPAN16Q9UKR8 245 aa16.33■□□□□ 0.2
ACTB-202ENST00000414620 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 PATE3B3GLJ2 98 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 CD19P15391 556 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 TKTL1P51854 596 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 LIMK1P53667 647 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 LRRC63Q05C16 580 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 NUDT18Q6ZVK8 323 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 RSRC2Q7L4I2 434 aaKnown RBP16.32■□□□□ 0.2
ACTB-202ENST00000414620 TRMT11Q7Z4G4 463 aaKnown RBP16.32■□□□□ 0.2
ACTB-202ENST00000414620 C11orf74Q86VG3 221 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 TMEFF1Q8IYR6 380 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 SPATA20Q8TB22 786 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 SLC35C1Q96A29 364 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 P2RY11Q96G91 374 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 SPACA7Q96KW9 195 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 TIGD1Q96MW7 591 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 ATXN2Q99700 1313 aaKnown RBP16.32■□□□□ 0.2
ACTB-202ENST00000414620 ULBP1Q9BZM6 244 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 MARK1Q9P0L2 795 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 WDR35Q9P2L0 1181 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 MBD1Q9UIS9 605 aaPredicted RBP16.32■□□□□ 0.2
ACTB-202ENST00000414620 HOOK1Q9UJC3 728 aaKnown RBP16.32■□□□□ 0.2
ACTB-202ENST00000414620 COQ4Q9Y3A0 265 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 RAD54BQ9Y620 910 aa16.32■□□□□ 0.2
ACTB-202ENST00000414620 SPTBN2O15020 2390 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 SLC12A8A0AV02 714 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 PRRT4C9JH25 899 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 PSMA7O14818 248 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 MAP3K13O43283 966 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 KLKB1P03952 638 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 ADRB1P08588 477 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 GABRG2P18507 467 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 CORO1AP31146 461 aaKnown RBP16.31■□□□□ 0.2
ACTB-202ENST00000414620 P2RY2P41231 377 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 DGKGP49619 791 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 YWHAGP61981 247 aaKnown RBP eCLIP16.31■□□□□ 0.21e-10■□□□□ 9.7
ACTB-202ENST00000414620 PDE4CQ08493 712 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 STIM1Q13586 685 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 CCDC40Q4G0X9 1142 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 SGO2Q562F6 1265 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 RAB41Q5JT25 222 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 CHPFQ8IZ52 775 aa16.31■□□□□ 0.2
ACTB-202ENST00000414620 ANKRD52Q8NB46 1076 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms