RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TNPO3Q9Y5L0 923 aaKnown RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 FRMPD4Q14CM0 1322 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 HNRNPCL2B2RXH8 293 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 CCDC188H7C350 402 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 HNRNPCL1O60812 293 aaKnown RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 CYP2A6P11509 494 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 TNFSF4P23510 183 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 RPS6KA3P51812 740 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 NAB2Q15742 525 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 UAP1Q16222 522 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 ASTE1Q2TB18 679 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 KRT71Q3SY84 523 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 TRPM8Q7Z2W7 1104 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 TMEM110Q86TL2 294 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 LURAP1LQ8IV03 231 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 CCDC33Q8N5R6 958 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 C1orf162Q8NEQ5 155 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 CHST13Q8NET6 341 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 GPRC5AQ8NFJ5 357 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 SYN2Q92777 582 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 TLCD1Q96CP7 247 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 FGD4Q96M96 766 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 ZNF570Q96NI8 536 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 SH2D3AQ9BRG2 576 aa9.78□□□□□ -0.84
SNHG3-201ENST00000413987 CHORDC1Q9UHD1 332 aaPredicted RBP9.78□□□□□ -0.84
SNHG3-201ENST00000413987 MCM3APO60318 1980 aa9.77□□□□□ -0.84
SNHG3-201ENST00000413987 UPK3BL1B0FP48 263 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 UPK3BL2E5RIL1 263 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 E9PMD0 336 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 BUB1O43683 1085 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 KLRC4O43908 158 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 GAS7O60861 476 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 DIAPH2O60879 1101 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 CSTBP04080 98 aaKnown RBP9.77□□□□□ -0.85
SNHG3-201ENST00000413987 PCSK2P16519 638 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 HSD17B2P37059 387 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 PSMC6P62333 389 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 SP2Q02086 613 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 CTTNQ14247 550 aaKnown RBP9.77□□□□□ -0.85
SNHG3-201ENST00000413987 PLCL1Q15111 1095 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 INAQ16352 499 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 SLC9C1Q4G0N8 1177 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 MOXD1Q6UVY6 613 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 SEPT14Q6ZU15 432 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 VSIG10LQ86VR7 867 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 ZBTB44Q8NCP5 570 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 ANKK1Q8NFD2 765 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 SCFD2Q8WU76 684 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 ZNF317Q96PQ6 595 aaPredicted RBP9.77□□□□□ -0.85
SNHG3-201ENST00000413987 MMP19Q99542 508 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 WRAP73Q9P2S5 460 aaPredicted RBP9.77□□□□□ -0.85
SNHG3-201ENST00000413987 GRHPRQ9UBQ7 328 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 SALL4Q9UJQ4 1053 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 GRID1Q9ULK0 1009 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 SIK3Q9Y2K2 1263 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 UBIAD1Q9Y5Z9 338 aa9.77□□□□□ -0.85
SNHG3-201ENST00000413987 ENO4A6NNW6 628 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 THAP12O43422 761 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 PSMD10O75832 226 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CSPG5O95196 566 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 MAPK3P27361 379 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 ECHS1P30084 290 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 HOXD13P35453 343 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 ARL4CP56559 192 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 ATP11AP98196 1134 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CACNB1Q02641 598 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 RELQ04864 619 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 MAN2A1Q16706 1144 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 YOD1Q5VVQ6 348 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 RRAGAQ7L523 313 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 OTOP1Q7RTM1 612 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 DPP9Q86TI2 863 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 KLHL7Q8IXQ5 586 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 OR2W6PQ8NHA6 318 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 ACTRT1Q8TDG2 376 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 PARK7Q99497 189 aaKnown RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 TRIM7Q9C029 511 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CCDC134Q9H6E4 229 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CCDC177Q9NQR7 707 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 FAM114A2Q9NRY5 505 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 EDARQ9UNE0 448 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 AP1M2Q9Y6Q5 423 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 KIAA1217Q5T5P2 1943 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 TMEM150BA6NC51 233 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 LRRC53A6NM62 1247 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 BTNL10A8MVZ5 291 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 SGK1O00141 431 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 DHX15O43143 795 aaKnown RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CEP104O60308 925 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 WFS1O76024 890 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 ZNF24P17028 368 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 ADORA2AP29274 412 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CCND2P30279 289 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 POLD2P49005 469 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 LACTBP83111 547 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 ROR2Q01974 943 aaKnown RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 CRHR2Q13324 411 aa9.76□□□□□ -0.85
SNHG3-201ENST00000413987 KLF1Q13351 362 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 ORC2Q13416 577 aaPredicted RBP9.76□□□□□ -0.85
SNHG3-201ENST00000413987 RPS6KA1Q15418 735 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms