RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 ARHGAP40Q5TG30 622 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 SNX30Q5VWJ9 437 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC39A4Q6P5W5 647 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 DTHD1Q6ZMT9 781 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ATG14Q6ZNE5 492 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 TPGS1Q6ZTW0 290 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 USP49Q70CQ1 688 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 HTR3DQ70Z44 454 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PRICKLE2Q7Z3G6 844 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 KCNK18Q7Z418 384 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM124AQ86V42 546 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 OSTM1Q86WC4 334 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ERICH1Q86X53 443 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CCDC83Q8IWF9 413 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 DHX40Q8IX18 779 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 NUP93Q8N1F7 819 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 C4orf32Q8N8J7 132 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 NECAB1Q8N987 351 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 C1orf127Q8N9H9 656 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 NSUN7Q8NE18 718 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 OR2T3Q8NH03 318 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 MYCBPAPQ8TBZ2 947 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 KBTBD7Q8WVZ9 684 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 OVCA2Q8WZ82 227 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 POMGNT1Q8WZA1 660 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 TTC9Q92623 222 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 GTF3C6Q969F1 213 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 FBXO32Q969P5 355 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 MYLPFQ96A32 169 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 SKA1Q96BD8 255 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 BIRC7Q96CA5 298 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PCED1BQ96HM7 432 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 NAF1Q96HR8 494 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 C8orf76Q96K31 380 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CNDP2Q96KP4 475 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZFRQ96KR1 1074 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZNF578Q96N58 590 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 MMS19Q96T76 1030 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PLIN2Q99541 437 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ELF4Q99607 663 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 REEP2Q9BRK0 252 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM213AQ9BRX8 229 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 MMTAG2Q9BU76 263 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ACE2Q9BYF1 805 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM117AQ9C073 453 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 SEMA4CQ9C0C4 833 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ELOVL4Q9GZR5 314 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 BTBD1Q9H0C5 482 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZHX3Q9H4I2 956 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 TM9SF3Q9HD45 589 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 MARK1Q9P0L2 795 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 THAP10Q9P2Z0 257 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 NXF1Q9UBU9 619 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 SEPT3Q9UH03 358 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CHORDC1Q9UHD1 332 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 IL17BQ9UHF5 180 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ADAMTS1Q9UHI8 967 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 DACH1Q9UI36 760 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 LSM7Q9UK45 103 aaKnown RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ITGA11Q9UKX5 1188 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 EXOC7Q9UPT5 735 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 CLCA2Q9UQC9 943 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC27A6Q9Y2P4 619 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 HEMK1Q9Y5R4 338 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 STYXL1Q9Y6J8 313 aa2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 ARID1BQ8NFD5 2236 aaPredicted RBP2.51□□□□□ -2.01
RNU4-53P-201ENST00000410828 PCDH15Q96QU1 1955 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 UBR5O95071 2799 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 PDCD11Q14690 1871 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 NUP210Q8TEM1 1887 aaPredicted RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 PTPRJQ12913 1337 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 A0A1W2PPC4 97 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 FAM47DPA6NHR8 397 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 KCNJ18B7U540 433 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TISP43B9A030 160 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CBX4O00257 560 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 KIAA0391O15091 583 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SLC26A4O43511 780 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 HCRTO43612 131 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TIMM44O43615 452 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TLR5O60602 858 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TSPAN3O60637 253 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TACC1O75410 805 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 DXOO77932 396 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 FSBPO95073 299 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 SEMA4FO95754 770 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 LDHAP00338 332 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 MT-CO3P00414 261 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 TNNC2P02585 160 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 DNTTP04053 509 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CYBBP04839 570 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 KRT18P05783 430 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 EPHX1P07099 455 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ZDHHC11BP0C7U3 371 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 CKMT2P17540 419 aa2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 PTPN1P18031 435 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ACO1P21399 889 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 WARSP23381 471 aaKnown RBP2.5□□□□□ -2.01
RNU4-53P-201ENST00000410828 ACSL1P33121 698 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms