RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 CHD7Q9P2D1 2997 aa17.64■□□□□ 0.41
GCFC2-202ENST00000409857 TCP11X1B4DZS4 312 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 SNX3O60493 162 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 CALCAP01258 141 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 EZRP15311 586 aaKnown RBP17.63■□□□□ 0.41
GCFC2-202ENST00000409857 POU3F3P20264 500 aaPredicted RBP17.63■□□□□ 0.41
GCFC2-202ENST00000409857 YWHAEP62258 255 aaKnown RBP17.63■□□□□ 0.41
GCFC2-202ENST00000409857 KCNJ2P63252 427 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 ZNF280DQ6N043 979 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 TMC7Q7Z402 723 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 FMNL3Q8IVF7 1028 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 DYDC1Q8WWB3 177 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 MRPL38Q96DV4 380 aaKnown RBP17.63■□□□□ 0.41
GCFC2-202ENST00000409857 B3GALT6Q96L58 329 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 KREMEN1Q96MU8 473 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 SMYD3Q9H7B4 428 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 ENTPD7Q9NQZ7 604 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 TRIP13Q15645 432 aaPredicted RBP17.63■□□□□ 0.41
GCFC2-202ENST00000409857 PSMD5Q16401 504 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 CYP1B1Q16678 543 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 KIRREL3Q8IZU9 778 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 THEM5Q8N1Q8 247 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 PPM1KQ8N3J5 372 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 MRPL43Q8N983 215 aaKnown RBP17.63■□□□□ 0.41
GCFC2-202ENST00000409857 ANKRD42Q8N9B4 389 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 PWWP2AQ96N64 755 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 SDCBP2Q9H190 292 aa17.63■□□□□ 0.41
GCFC2-202ENST00000409857 TRANK1O15050 2925 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 TMEM120BA0PK00 339 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 OR6C75A6NL08 312 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 GRIN2CQ14957 1233 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 UNC93AQ86WB7 457 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 UBR7Q8N806 425 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 ATG4AQ8WYN0 398 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 ARHGEF2Q92974 986 aaKnown RBP17.62■□□□□ 0.41
GCFC2-202ENST00000409857 MRPL45Q9BRJ2 306 aaKnown RBP17.62■□□□□ 0.41
GCFC2-202ENST00000409857 L3MBTL1Q9Y468 752 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 TIMM13Q9Y5L4 95 aaPredicted RBP17.62■□□□□ 0.41
GCFC2-202ENST00000409857 C2orf71A6NGG8 1288 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 ECEL1O95672 775 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 CXCL14O95715 111 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 C1RP00736 705 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 GSTA1P08263 222 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 MFAP3P55082 362 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 FMO1Q01740 532 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 TCEAL1Q15170 157 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 TAOK1Q7L7X3 1001 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 GDAP1Q8TB36 358 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 ZNF653Q96CK0 615 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 STAMBPL1Q96FJ0 436 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 ACBD6Q9BR61 282 aa17.62■□□□□ 0.41
GCFC2-202ENST00000409857 HGSO14964 777 aaPredicted RBP17.61■□□□□ 0.41
GCFC2-202ENST00000409857 SLC8A1P32418 973 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 GBP1P32455 592 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 ADCY1Q08828 1119 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 CALCOCO2Q13137 446 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 CTXN3Q4LDR2 81 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 SLC8B1Q6J4K2 584 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 VSTM1Q6UX27 236 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 SCARA5Q6ZMJ2 495 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 RTP3Q9BQQ7 232 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 SNX25Q9H3E2 840 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 PRDM12Q9H4Q4 367 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 KCNK9Q9NPC2 374 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 DDX43Q9NXZ2 648 aaKnown RBP17.61■□□□□ 0.41
GCFC2-202ENST00000409857 BARX2Q9UMQ3 279 aaPredicted RBP17.61■□□□□ 0.41
GCFC2-202ENST00000409857 RFXAPO00287 272 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 OAS1P00973 400 aaKnown RBP17.61■□□□□ 0.41
GCFC2-202ENST00000409857 WEE2P0C1S8 567 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 PCSK1P29120 753 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 GNL1P36915 607 aaPredicted RBP17.61■□□□□ 0.41
GCFC2-202ENST00000409857 CDH8P55286 799 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 MPP2Q14168 576 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 PRSS55Q6UWB4 352 aaPredicted RBP17.61■□□□□ 0.41
GCFC2-202ENST00000409857 PHLDB2Q86SQ0 1253 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 OSTM1Q86WC4 334 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 FAM71AQ8IYT1 594 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 EMILIN2Q9BXX0 1053 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 NSRP1Q9H0G5 558 aaKnown RBP17.61■□□□□ 0.41
GCFC2-202ENST00000409857 STMN4Q9H169 189 aaPredicted RBP17.61■□□□□ 0.41
GCFC2-202ENST00000409857 CISHQ9NSE2 258 aa17.61■□□□□ 0.41
GCFC2-202ENST00000409857 CILPO75339 1184 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 IRS1P35568 1242 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 RAP1GAPP47736 663 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 NDUFV1P49821 464 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 PDE6CP51160 858 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 RWDD2BP57060 319 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 NCALDP61601 193 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 ZKSCAN8Q15776 578 aaPredicted RBP17.6■□□□□ 0.41
GCFC2-202ENST00000409857 PLPP4Q5VZY2 271 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 NUGGCQ68CJ6 796 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 KIF2BQ8N4N8 673 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 HERPUD2Q9BSE4 406 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 TRIM7Q9C029 511 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 DNAI2Q9GZS0 605 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 ASIC3Q9UHC3 531 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 CNTN6Q9UQ52 1028 aa17.6■□□□□ 0.41
GCFC2-202ENST00000409857 USP15Q9Y4E8 981 aaPredicted RBP17.6■□□□□ 0.41
GCFC2-202ENST00000409857 MTCL1Q9Y4B5 1905 aaKnown RBP17.6■□□□□ 0.41
GCFC2-202ENST00000409857 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms