RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 SLC25A23Q9BV35 468 aa13.34□□□□□ -0.27
RNF43-201ENST00000407977 ABLIM1O14639 778 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 TBC1D12O60347 775 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 GH1P01241 217 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 SKIV2L2P42285 1042 aaKnown RBP13.33□□□□□ -0.27
RNF43-201ENST00000407977 DGKDQ16760 1214 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 PDZK1Q5T2W1 519 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 ASB2Q96Q27 587 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 CRAMP1Q96RY5 1269 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 CGRRF1Q99675 332 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 KLHL31Q9H511 634 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 CYP3A43Q9HB55 503 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 LRRC4BQ9NT99 713 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 DDX18Q9NVP1 670 aaKnown RBP13.33□□□□□ -0.27
RNF43-201ENST00000407977 CACNA2D2Q9NY47 1150 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 NINJ2Q9NZG7 142 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 PIM2Q9P1W9 311 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 USP18Q9UMW8 372 aa13.33□□□□□ -0.27
RNF43-201ENST00000407977 M0QYT0 321 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 PEX1O43933 1283 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 SNX3O60493 162 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 UNC5CO95185 931 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 MYL4P12829 197 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 RPL21P46778 160 aaKnown RBP13.33□□□□□ -0.28
RNF43-201ENST00000407977 TMEM26Q6ZUK4 368 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 NET1Q7Z628 596 aaPredicted RBP13.33□□□□□ -0.28
RNF43-201ENST00000407977 EXOC3L1Q86VI1 746 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 CREG2Q8IUH2 290 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 CYP4Z2PQ8N1L4 340 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 ACTL9Q8TC94 416 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 CKAP2Q8WWK9 683 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 H7C0S8 307 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 MAGEA10P43363 369 aaPredicted RBP13.33□□□□□ -0.28
RNF43-201ENST00000407977 VAC14Q08AM6 782 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 TOP3AQ13472 1001 aaPredicted RBP13.33□□□□□ -0.28
RNF43-201ENST00000407977 CHSY1Q86X52 802 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 ZNF34Q8IZ26 560 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.33□□□□□ -0.28
RNF43-201ENST00000407977 SRPK1Q96SB4 655 aaKnown RBP13.33□□□□□ -0.28
RNF43-201ENST00000407977 SH2D3AQ9BRG2 576 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 CINPQ9BW66 212 aaPredicted RBP13.33□□□□□ -0.28
RNF43-201ENST00000407977 AGXT2Q9BYV1 514 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 TMEM51Q9NW97 253 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 CLCA2Q9UQC9 943 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 INO80Q9ULG1 1556 aaPredicted RBP13.33□□□□□ -0.28
RNF43-201ENST00000407977 PREX2Q70Z35 1606 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 SLC37A4O43826 429 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 CHN2P52757 468 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 PPP4CP60510 307 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 N4BP2L1Q5TBK1 243 aaPredicted RBP13.33□□□□□ -0.28
RNF43-201ENST00000407977 SLFN11Q7Z7L1 901 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 ARHGEF19Q8IW93 802 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 MYO1HQ8N1T3 1032 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 CAMKK2Q96RR4 588 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 GPAMQ9HCL2 828 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 STK39Q9UEW8 545 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 NDUFAF1Q9Y375 327 aa13.33□□□□□ -0.28
RNF43-201ENST00000407977 FBXO21O94952 628 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 CAMTA2O94983 1202 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 HOXB8P17481 243 aaPredicted RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 CRABP2P29373 138 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 FBXO33Q7Z6M2 555 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 RNFT2Q96EX2 444 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 DDIT4Q9NX09 232 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 ZSCAN32Q9NX65 697 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 FAM20BO75063 409 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 NAMPTP43490 491 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 HARS2P49590 506 aaKnown RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 GALNTL6Q49A17 601 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 OR6J1Q8NGC5 347 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 ACSF2Q96CM8 615 aaPredicted RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 ZBED2Q9BTP6 218 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 RNPEPQ9H4A4 650 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 ERAP1Q9NZ08 941 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 C2CD2Q9Y426 696 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 TMEM114B3SHH9 223 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 ITGA4P13612 1032 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 GSTT1P30711 240 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 CAPZA2P47755 286 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 TRAF3Q13114 568 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 NOTUMQ6P988 496 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 IKBIPQ70UQ0 350 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 CAMK1DQ8IU85 385 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 SERHL2Q9H4I8 314 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 QTRT2Q9H974 415 aaKnown RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 SERHLQ9NQF3 203 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 INTS13Q9NVM9 706 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 CORO1CQ9ULV4 474 aaPredicted RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 GLI2P10070 1586 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 LIN7AO14910 233 aaPredicted RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 MSH3P20585 1137 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 NR1H2P55055 460 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 ZNF544Q6NX49 715 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 PALB2Q86YC2 1186 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 ZCCHC9Q8N567 271 aaKnown RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 TMEM237Q96Q45 408 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 PRKD2Q9BZL6 878 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms