RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 CREBRFQ8IUR6 639 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 ARHGEF19Q8IW93 802 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 SFTPA1Q8IWL2 248 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TRIM59Q8IWR1 403 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 PPM1KQ8N3J5 372 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 UBR7Q8N806 425 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 LMO3Q8TAP4 145 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 UBA3Q8TBC4 463 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 FAM174AQ8TBP5 190 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 OVCA2Q8WZ82 227 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 NDRG1Q92597 394 aaKnown RBP6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 FOXJ1Q92949 421 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 ATP2A3Q93084 1043 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 TMEM176AQ96HP8 235 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 NT5C1BQ96P26 610 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 P2RY13Q9BPV8 354 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 DUSP16Q9BY84 665 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 NACA2Q9H009 215 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 CLSTN2Q9H4D0 955 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 FBXO4Q9UKT5 387 aa6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 MYO18AQ92614 2054 aaKnown RBP6.08□□□□□ -1.44
HMGB1P20-201ENST00000402555 DMXL1Q9Y485 3027 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 CHURC1-FNTBB4DL54 471 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 K7ESF4 209 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 RNF225M0QZC1 329 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 PIK3R2O00459 728 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 NFATC1O95644 943 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 ADH1CP00326 375 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 LMNAP02545 664 aaKnown RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 AFPP02771 609 aaKnown RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 RARGP13631 454 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 PFKLP17858 780 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 BRD2P25440 801 aaKnown RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 OPRD1P41143 372 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 CXCL12P48061 93 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SLC6A11P48066 632 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 PXNP49023 591 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 FNTBP49356 437 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 CCR3P51677 355 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SEC13P55735 322 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 APBA1Q02410 837 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 KDSRQ06136 332 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 PDE4CQ08493 712 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SRSF5Q13243 272 aaKnown RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 DHCR24Q15392 516 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 LPAL2Q16609 132 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 ZNF528Q3MIS6 628 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SGO2Q562F6 1265 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 HSP90AA4PQ58FG1 418 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 C4orf48Q5BLP8 95 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 C10orf120Q5SQS8 335 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 LY6G5CQ5SRR4 150 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SNX30Q5VWJ9 437 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 ARHGAP17Q68EM7 881 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 GJB7Q6PEY0 223 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 C1orf228Q6PIY5 440 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 RHBDF2Q6PJF5 856 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 FOXR2Q6PJQ5 311 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 ZC3H14Q6PJT7 736 aaKnown RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 TMEM270Q6UE05 265 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 IRF2BP1Q8IU81 584 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 BBS7Q8IWZ6 715 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 ADGRG2Q8IZP9 1017 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SPEM1Q8N4L4 309 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 DCLK2Q8N568 766 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 TTC39CQ8N584 583 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 TRIML1Q8N9V2 468 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SUMF1Q8NBK3 374 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 ZBTB44Q8NCP5 570 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 ATRIPQ8WXE1 791 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 TFAP2BQ92481 460 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 NELL1Q92832 810 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 CD101Q93033 1021 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 FAXDC2Q96IV6 333 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 CNOT6LQ96LI5 555 aaKnown RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 KREMEN1Q96MU8 473 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 ZSWIM1Q9BR11 485 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 CRACR2AQ9BSW2 395 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 INTS2Q9H0H0 1204 aaKnown RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 FBXO44Q9H4M3 255 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SLC24A3Q9HC58 644 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 TLR8Q9NR97 1041 aaKnown RBP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 LMBRD1Q9NUN5 540 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 COMMD8Q9NX08 183 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 ZSCAN32Q9NX65 697 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 RWDD2AQ9UIY3 292 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 NAGPAQ9UK23 515 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 TSPAN16Q9UKR8 245 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SCML2Q9UQR0 700 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 SH3BP1Q9Y3L3 701 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 PCDHB4Q9Y5E5 795 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 GON4LQ3T8J9 2241 aa6.07□□□□□ -1.44
HMGB1P20-201ENST00000402555 NCOR2Q9Y618 2525 aa6.06□□□□□ -1.44
HMGB1P20-201ENST00000402555 KIAA1549LQ6ZVL6 1849 aa6.06□□□□□ -1.44
HMGB1P20-201ENST00000402555 SPAG17Q6Q759 2223 aa6.06□□□□□ -1.44
HMGB1P20-201ENST00000402555 E2F8A0AVK6 867 aa6.06□□□□□ -1.44
HMGB1P20-201ENST00000402555 O00370 1275 aa6.06□□□□□ -1.44
HMGB1P20-201ENST00000402555 SLC9A3R1O14745 358 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms