RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 PSMC3IPQ9P2W1 217 aaPredicted RBP12.2□□□□□ -0.46
ITSN1-211ENST00000399355 MTF2Q9Y483 593 aaPredicted RBP12.2□□□□□ -0.46
ITSN1-211ENST00000399355 WDR27A2RRH5 827 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 PDHXO00330 501 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 ZBED1O96006 694 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 MORF4L2Q15014 288 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 GRIK4Q16099 956 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 LRRC36Q1X8D7 754 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 EP400NLQ6ZTU2 488 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 WDR60Q8WVS4 1066 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 ZNF778Q96MU6 729 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 CCDC77Q9BR77 488 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 BCO2Q9BYV7 579 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 NMUR2Q9GZQ4 415 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 SMARCAD1Q9H4L7 1026 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 MAN1C1Q9NR34 630 aa12.2□□□□□ -0.46
ITSN1-211ENST00000399355 EDF1O60869 148 aaKnown RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 MRPS5P82675 430 aaKnown RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 UBAP2LQ14157 1087 aaKnown RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 OLFML1Q6UWY5 402 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 GPRIN1Q7Z2K8 1008 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 ARID3BQ8IVW6 561 aaPredicted RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 C10orf82Q8WW14 230 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 VCPIP1Q96JH7 1222 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 TRIM6Q9C030 488 aaPredicted RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 NSRP1Q9H0G5 558 aaKnown RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 FLRT1Q9NZU1 646 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 ZC3H7BQ9UGR2 993 aaKnown RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 DNAJC25-GNG10A0A024R161 153 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 TTC24A2A3L6 582 aaPredicted RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 ERVK-10P10266 1014 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 PGFP49763 221 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 ARL4CP56559 192 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 ADIGQ0VDE8 80 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 AP1B1Q10567 949 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 TTLL4Q14679 1199 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 MTHFD1LQ6UB35 978 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 SNX31Q8N9S9 440 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 TTC16Q8NEE8 873 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 USP33Q8TEY7 942 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 CELF6Q96J87 481 aaKnown RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 ACTR5Q9H9F9 607 aaPredicted RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 RXFP1Q9HBX9 757 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 LGALS13Q9UHV8 139 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 WDFY3Q8IZQ1 3526 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 A6NNZ2 444 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 BTBD19C9JJ37 291 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 ITM2AO43736 263 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 MT-ND3P03897 115 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 CYP2F1P24903 491 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 CETN2P41208 172 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 ITIH4Q14624 930 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 TUBB8Q3ZCM7 444 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 SH3D19Q5HYK7 790 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 KIAA0319Q5VV43 1072 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 NME8Q8N427 588 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 FAM13CQ8NE31 585 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 CMASQ8NFW8 434 aaPredicted RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 RNF157Q96PX1 679 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 ATXN3LQ9H3M9 355 aa12.19□□□□□ -0.46
ITSN1-211ENST00000399355 DENND2DQ9H6A0 471 aaPredicted RBP12.19□□□□□ -0.46
ITSN1-211ENST00000399355 DNAJC8O75937 253 aaPredicted RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 MYL2P10916 166 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 ARRB2P32121 409 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 RPL10AP62906 217 aaKnown RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 HADHQ16836 314 aaKnown RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 ERO1BQ86YB8 467 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 TREML1Q86YW5 311 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 VTI1AQ96AJ9 217 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 PTPN18Q99952 460 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 NT5C1AQ9BXI3 368 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 TNFSF13BQ9Y275 285 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 VPS13AQ96RL7 3174 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 H0YCG3 227 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 APOC4-APOC2K7ER74 178 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 MFSD11O43934 449 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 APOC2P02655 101 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 GBP2P32456 591 aaPredicted RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 ZNF143P52747 638 aaPredicted RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 ALDH18A1P54886 795 aaKnown RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 CACNB2Q08289 660 aaPredicted RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 KHDC1Q4VXA5 237 aaKnown RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 ZNF534Q76KX8 674 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 PCDHGC3Q9UN70 934 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 NRP1O14786 923 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 ENO1P06733 434 aaKnown RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 INHBAP08476 426 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 PAX7P23759 505 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 ZBTB16Q05516 673 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 UNC5AQ6ZN44 842 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 RINLQ6ZS11 566 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 SRPK1Q96SB4 655 aaKnown RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 STMN4Q9H169 189 aaPredicted RBP12.18□□□□□ -0.46
ITSN1-211ENST00000399355 CCDC134Q9H6E4 229 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 SLC24A3Q9HC58 644 aa12.18□□□□□ -0.46
ITSN1-211ENST00000399355 HBP1O60381 514 aa12.17□□□□□ -0.46
ITSN1-211ENST00000399355 USP1O94782 785 aa12.17□□□□□ -0.46
ITSN1-211ENST00000399355 UNC5CO95185 931 aa12.17□□□□□ -0.46
ITSN1-211ENST00000399355 SDC4P31431 198 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms