RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 DOK6Q6PKX4 331 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 PRPF39Q86UA1 669 aaKnown RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 PLD3Q8IV08 490 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 PCYOX1LQ8NBM8 494 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 DIS3LQ8TF46 1054 aaKnown RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 SPACA7Q96KW9 195 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 USE1Q9NZ43 259 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 DYRK3O43781 588 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 PLA2G6O60733 806 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 CDH16O75309 829 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 NME5P56597 212 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 KCNA10Q16322 511 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 GALNTL6Q49A17 601 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 PREPLQ4J6C6 727 aaPredicted RBP14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 ARMC2Q8NEN0 867 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 VPS50Q96JG6 964 aa14.69□□□□□ -0.06
PCDHA11-201ENST00000398640 P4HA2O15460 535 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 SEPT4O43236 478 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 CPA2P48052 419 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 ZNF473Q8WTR7 871 aaKnown RBP14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 CGRRF1Q99675 332 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 FAM86B1E9PN63 330 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 APOA4P06727 396 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 FAM86B2P0C5J1 330 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 CXCL8P10145 99 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 ACAD10Q6JQN1 1059 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 PPIL6Q8IXY8 311 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 TMEM253P0C7T8 217 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 CBWD2Q8IUF1 395 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 STAMBPL1Q96FJ0 436 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 MAGED4Q96JG8 741 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 EXOSC4Q9NPD3 245 aaKnown RBP14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 ZC4H2Q9NQZ6 224 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 RIC8BQ9NVN3 520 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 ITGA11Q9UKX5 1188 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 SKAP2O75563 359 aaPredicted RBP14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 CCDC159P0C7I6 412 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 CDH2P19022 906 aaPredicted RBP14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 EDEM1Q92611 657 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 DDX28Q9NUL7 540 aaKnown RBP14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 RAB23Q9ULC3 237 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 NDUFS2O75306 463 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 ANXA9O76027 345 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 SLURP2P0DP57 97 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 PLOD1Q02809 727 aaPredicted RBP14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 UGT3A1Q6NUS8 523 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 C16orf59Q7L2K0 433 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 DNAAF5Q86Y56 855 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 CDK5RAP1Q96SZ6 601 aaKnown RBP14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 LZTS1Q9Y250 596 aa14.68□□□□□ -0.06
PCDHA11-201ENST00000398640 NFASCO94856 1347 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 CFAP73A6NFT4 308 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 FAM47E-STBD1D6RA91 191 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 F8W810 466 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 SOAT2O75908 522 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 TNNI3P19429 210 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 PKN2Q16513 984 aaKnown RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 CCDC142Q17RM4 750 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 ZNF677Q86XU0 584 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 USP13Q92995 863 aaPredicted RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 PURBQ96QR8 312 aaKnown RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 RNF19AQ9NV58 838 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 UXTQ9UBK9 157 aaPredicted RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 ZMYND8Q9ULU4 1186 aaPredicted RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 NCKAP1Q9Y2A7 1128 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 PARNO95453 639 aaKnown RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 CYP3A4P08684 503 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 SELPP16109 830 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 CHI3L1P36222 383 aaPredicted RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 NEK2P51955 445 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 TTLL9Q3SXZ7 439 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 DUSP28Q4G0W2 176 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 TRIM65Q6PJ69 517 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 CCDC149Q6ZUS6 474 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 LINC00523Q86TU6 105 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 NT5DC3Q86UY8 548 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 RASAL3Q86YV0 1011 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 KIF2BQ8N4N8 673 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 CYP2W1Q8TAV3 490 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 GRID1Q9ULK0 1009 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 TDRKHQ9Y2W6 561 aaKnown RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 PEAK1Q9H792 1746 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 EVPLLA8MZ36 301 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 FAM107AO95990 144 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 GYPCP04921 128 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 FBXO47Q5MNV8 452 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 WDR49Q8IV35 697 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 PPTC7Q8NI37 304 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 UROC1Q96N76 676 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 XPO6Q96QU8 1125 aaKnown RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 APOL2Q9BQE5 337 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 RUVBL2Q9Y230 463 aaKnown RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 TMEM120BA0PK00 339 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 DUSP11O75319 330 aaKnown RBP14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 HPGDP15428 266 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 GPC1P35052 558 aa14.67□□□□□ -0.06
PCDHA11-201ENST00000398640 FOXR1Q6PIV2 292 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms