RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SUPT20HL2P0C7V6 817 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 CCNFP41002 786 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 DLG4P78352 724 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 KIF19Q2TAC6 998 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SUPT20HL1Q3ZLR7 823 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 TSHZ1Q6ZSZ6 1077 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 IFT43Q96FT9 208 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 NFKBIZQ9BYH8 718 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 DMAP1Q9NPF5 467 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF112Q9UJU3 913 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SMIM31A0A1B0GVY4 71 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 DPPA5A6NC42 116 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 FAM196BA6NMK8 535 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ACKR2O00590 384 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 KRT16P08779 473 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 PIM1P11309 404 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 GCLCP48506 637 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 CDK7P50613 346 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 NCOA4Q13772 614 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 CDCA2Q69YH5 1023 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 RSPH3Q86UC2 560 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF280CQ8ND82 737 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 GTSE1Q9NYZ3 720 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ATXN10Q9UBB4 475 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 KRT36O76013 467 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 PYGLP06737 847 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SSTR3P32745 418 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 PLOD1Q02809 727 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 LRRC8BQ6P9F7 803 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SETD3Q86TU7 594 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF276Q8N554 614 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF75CPQ92670 426 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 PPP2R3CQ969Q6 453 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SPATA17Q96L03 361 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 KIFC3Q9BVG8 833 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 GRIP2Q9C0E4 1043 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 PCMTD2Q9NV79 361 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 TAS2R1Q9NYW7 299 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 E2F8A0AVK6 867 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ENO3P13929 434 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 PPIDQ08752 370 aaKnown RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 SFSWAPQ12872 951 aaKnown RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 KRT27Q7Z3Y8 459 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 MZB1Q8WU39 189 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 KCNK16Q96T55 309 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 BTBD10Q9BSF8 475 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 GTF2IRD1Q9UHL9 959 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 CPSF3Q9UKF6 684 aaKnown RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 BAG5Q9UL15 447 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF214Q9UL59 606 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 PPP2R3BQ9Y5P8 575 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 MAFBQ9Y5Q3 323 aaPredicted RBP5.64□□□□□ -1.51
PTPRD-205ENST00000397611 LY75O60449 1722 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 ADGRA2Q96PE1 1338 aa5.64□□□□□ -1.51
PTPRD-205ENST00000397611 EME2A4GXA9 379 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-205ENST00000397611 ANKRD63C9JTQ0 380 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 MDM4O15151 490 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 DLGAP3O95886 979 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 ZBED1O96006 694 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 CCND2P30279 289 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 WASHC5Q12768 1159 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 TCP10Q12799 353 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 PTK7Q13308 1070 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 EMC2Q15006 297 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 OTOAQ7RTW8 1153 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF786Q8N393 782 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 NAT8LQ8N9F0 302 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 DDI1Q8WTU0 396 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 EXT2Q93063 718 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 DACH2Q96NX9 599 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 BTBD9Q96Q07 612 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 PAFAH2Q99487 392 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 DBNDD1Q9H9R9 158 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 SF3B1O75533 1304 aaKnown RBP eCLIP5.63□□□□□ -1.51
PTPRD-205ENST00000397611 ATP6V1G1O75348 118 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 OCM2P0CE71 109 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 OCMP0CE72 109 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-205ENST00000397611 TPSB2P20231 275 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 SERPINB1P30740 379 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 KCNQ4P56696 695 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF280AP59817 542 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-205ENST00000397611 NOMO1Q15155 1222 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 TPSAB1Q15661 275 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 DOK7Q18PE1 504 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 HABP4Q5JVS0 413 aaKnown RBP5.63□□□□□ -1.51
PTPRD-205ENST00000397611 ANGEL2Q5VTE6 544 aaKnown RBP5.63□□□□□ -1.51
PTPRD-205ENST00000397611 TMEM270Q6UE05 265 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 ARID3BQ8IVW6 561 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-205ENST00000397611 SIX5Q8N196 739 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 CCNYL1Q8N7R7 359 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 LENG1Q96BZ8 264 aaPredicted RBP5.63□□□□□ -1.51
PTPRD-205ENST00000397611 HERPUD2Q9BSE4 406 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 MRPL1Q9BYD6 325 aaKnown RBP5.63□□□□□ -1.51
PTPRD-205ENST00000397611 DAPK2Q9UIK4 370 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 COMMD3-BMI1R4GMX3 469 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 A6NJR5 290 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 AP3B1O00203 1094 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 LRCH4O75427 683 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 T-ENOLP0DO92 83 aa5.63□□□□□ -1.51
PTPRD-205ENST00000397611 MYL2P10916 166 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms