RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 DCXO43602 365 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 MAPTP10636 758 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 STIP1P31948 543 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 COPAP53621 1224 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 PSMC1P62191 440 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 MRPS5P82675 430 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 MAP3K10Q02779 954 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 ZACNQ401N2 412 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 FASTKD1Q53R41 847 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 RAB6CQ53S08 254 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 FKBP1CQ5VVH2 108 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 TATDN1Q6P1N9 297 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 TMEM130Q8N3G9 435 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 LENG1Q96BZ8 264 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 RAB6CQ9H0N0 254 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 XPNPEP1Q9NQW7 623 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 GPATCH2LQ9NWQ4 482 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 LZTS1Q9Y250 596 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 NR2E3Q9Y5X4 410 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 C4BPAP04003 597 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 TCN1P20061 433 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 KDELR1P24390 212 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 CRADDP78560 199 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 CNGA3Q16281 694 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 HADHQ16836 314 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 LGSNQ5TDP6 509 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 TMCO4Q5TGY1 634 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 TRIM72Q6ZMU5 477 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 KIAA0319LQ8IZA0 1049 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 TMEM35BQ8NCS4 154 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 PGBD4Q96DM1 585 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 PRMT6Q96LA8 375 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 DHRS4Q9BTZ2 278 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 MSTO1Q9BUK6 570 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 POLR3FQ9H1D9 316 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 LIN28AQ9H9Z2 209 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 CREBZFQ9NS37 354 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 IL1RAPL1Q9NZN1 696 aa10.19□□□□□ -0.78
TRIM39-203ENST00000396547 MAGED2Q9UNF1 606 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 TDRKHQ9Y2W6 561 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 CTDP1Q9Y5B0 961 aaPredicted RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 MYH9P35579 1960 aaKnown RBP10.19□□□□□ -0.78
TRIM39-203ENST00000396547 E9PBE3 544 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 KLHL41O60662 606 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 PABPC4LP0CB38 370 aaKnown RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CSH1P0DML2 217 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CSH2P0DML3 217 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CDH6P55285 790 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 ROR1Q01973 937 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 SLC18A2Q05940 514 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 TBL3Q12788 808 aaKnown RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 NADK2Q4G0N4 442 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 PABPC1LQ4VXU2 614 aaKnown RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 SH3PXD2AQ5TCZ1 1133 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 DRICH1Q6PGQ1 229 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 B3GNT9Q6UX72 402 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 DNAJC14Q6Y2X3 702 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 MAP7D3Q8IWC1 876 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CDAN1Q8IWY9 1227 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 NETO2Q8NC67 525 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 MOCOSQ96EN8 888 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 SMYD2Q9NRG4 433 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 DDX56Q9NY93 547 aaKnown RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CNTN3Q9P232 1028 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 GOLGA8QA0A0J9YX86 632 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 GOLGA8OA6NCC3 632 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 GOLGA8NF8WBI6 632 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 NOP56O00567 594 aaKnown RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 NPM3O75607 178 aaKnown RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CALB1P05937 261 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 KRT19P08727 400 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 FKBP1BP68106 108 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 PIGHQ14442 188 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 TLR1Q15399 786 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 DENND1BQ6P3S1 775 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 KLHDC10Q6PID8 442 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 PHTF2Q8N3S3 785 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 RAB3IL1Q8TBN0 382 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 DEPDC1BQ8WUY9 529 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 TFAP2BQ92481 460 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CLMNQ96JQ2 1002 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 ZDHHC15Q96MV8 337 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 FAM210AQ96ND0 272 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 POMPQ9Y244 141 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 NEMP1O14524 444 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 PMM2O15305 246 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 ATP6V1G1O75348 118 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 LRCH4O75427 683 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 SERPINA6P08185 405 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CD1EP15812 388 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 SERPINB5P36952 375 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 RAP1GAPP47736 663 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 MYL6P60660 151 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 MRPS22P82650 360 aaKnown RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 TFAMQ00059 246 aaKnown RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CCDC142Q17RM4 750 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 ANKRD20A4Q4UJ75 823 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 C6orf52Q5T4I8 152 aa10.18□□□□□ -0.78
TRIM39-203ENST00000396547 ACBD5Q5T8D3 534 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-203ENST00000396547 CDR2LQ86X02 465 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms