RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TFAP2DQ7Z6R9 452 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ARID3BQ8IVW6 561 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 CCDC60Q8IWA6 550 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 REPS2Q8NFH8 660 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 CASP10Q92851 521 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 KCNB2Q92953 911 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 TMEM245Q9H330 911 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 IMPAD1Q9NX62 359 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 BARX2Q9UMQ3 279 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 GTF2A1LQ9UNN4 478 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 FRMPD1Q5SYB0 1578 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 VIL1P09327 827 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 SERAC1Q96JX3 654 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 SMPD4Q9NXE4 827 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 XYLBO75191 536 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ALBP02768 609 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 RRM2P31350 389 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 NDST1P52848 882 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 MAPK7Q13164 816 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 STX5Q13190 355 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ACVR2BQ13705 512 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 FSCN1Q16658 493 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 COLGALT1Q8NBJ5 622 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 B3GALNT2Q8NCR0 500 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 SMARCD1Q96GM5 515 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 CELF6Q96J87 481 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 MAGED4Q96JG8 741 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 MRPL9Q9BYD2 267 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 WDR41Q9HAD4 459 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 FBXO10Q9UK96 956 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ZC3H13Q5T200 1668 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 A0A087X0T9 212 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 FAM228BP0C875 321 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ITGB6P18564 788 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 TNNI3P19429 210 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 LSP1P33241 339 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 CLK1P49759 484 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 RPS7P62081 194 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 CAPRIN2Q6IMN6 1127 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 SLC27A1Q6PCB7 646 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 CCDC81Q6ZN84 652 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 LRRC6Q86X45 466 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 GPC2Q8N158 579 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 KIF2BQ8N4N8 673 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 KRT84Q9NSB2 600 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 RIMS1Q86UR5 1692 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 CD44P16070 742 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 PSMA4P25789 261 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 CSTF3Q12996 717 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 FNDC3BQ53EP0 1204 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 TMEM121Q9BTD3 319 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ABHD16BQ9H3Z7 469 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 UTP6Q9NYH9 597 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 TRPV2Q9Y5S1 764 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 USP1O94782 785 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 RRM1P23921 792 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 OR1E1P30953 314 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 CCNG1P51959 295 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ACOX1Q15067 660 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 P2RX7Q99572 595 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 RBM22Q9NW64 420 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 DIP2BQ9P265 1576 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 NCKAP1Q9Y2A7 1128 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 TDRKHQ9Y2W6 561 aaKnown RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 MICAL2O94851 1124 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 OVGP1Q12889 678 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 DNAJC3Q13217 504 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 PTPAQ15257 358 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 TRIP4Q15650 581 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-203ENST00000394872 ILDR2Q71H61 639 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 KIAA2013Q8IYS2 634 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 CDCA5Q96FF9 252 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 GPAMQ9HCL2 828 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 TSPAN16Q9UKR8 245 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 RNF103O00237 685 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 TFE3P19532 575 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-203ENST00000394872 KCNA3P22001 575 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 YWHAQP27348 245 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 HSD17B3P37058 310 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 ITGA9Q13797 1035 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 CSHL1Q14406 222 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 ANGPT1Q15389 498 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 MARC1Q5VT66 337 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 IRAK1BP1Q5VVH5 260 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 C11orf63Q6NUN7 778 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 ADGRA1Q86SQ6 560 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 CASKIN2Q8WXE0 1202 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 ERLEC1Q96DZ1 483 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 RNF208Q9H0X6 261 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 SPG21Q9NZD8 308 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 UXTQ9UBK9 157 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-203ENST00000394872 LZTS1Q9Y250 596 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 CEMIPQ8WUJ3 1361 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 RAMP2O60895 175 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 RTN3O95197 1032 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-203ENST00000394872 IGFBP4P22692 258 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 AXLP30530 894 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 CYP4Z1Q86W10 505 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 RIN3Q8TB24 985 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms