RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 VWA1Q6PCB0 445 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 LCNL1Q6ZST4 164 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 PARS2Q7L3T8 475 aaKnown RBP3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 RRAGAQ7L523 313 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 KRT27Q7Z3Y8 459 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 WDR53Q7Z5U6 358 aaPredicted RBP3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 TMTC1Q8IUR5 882 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 CPOQ8IVL8 374 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 SIRT6Q8N6T7 355 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 C11orf44Q8N8P7 122 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 FSIP1Q8NA03 581 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 PCYOX1LQ8NBM8 494 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 SUPT20HQ8NEM7 779 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 HAS1Q92839 578 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 GLG1Q92896 1179 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 REXO5Q96IC2 774 aaKnown RBP3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 HAPLN3Q96S86 360 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 KLC2Q9H0B6 622 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 PREBQ9HCU5 417 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 UBN1Q9NPG3 1134 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 IRAK4Q9NWZ3 460 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 TMEM160Q9NX00 188 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 MAP3K20Q9NYL2 800 aaKnown RBP3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 GGA3Q9NZ52 723 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 MGAT4CQ9UBM8 478 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 RAPGEFL1Q9UHV5 662 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 RIMKLBQ9ULI2 386 aa3.33□□□□□ -1.88
TRAJ40-201ENST00000390497 PIPSLA2A3N6 862 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 A6NLC8 198 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 F5H0A9 414 aaPredicted RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 K7ESM1 405 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 AGPSO00116 658 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 YY2O15391 372 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 MPPED1O15442 326 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 PEX1O43933 1283 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 FAM20BO75063 409 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 PPP6R2O75170 966 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 RPP40O75818 363 aaKnown RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 KRT38O76015 456 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 DDX58O95786 925 aaKnown RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 EGR2P11161 476 aaPredicted RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 MYCLP12524 364 aaPredicted RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 CREB1P16220 341 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 PPP3CBP16298 524 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 RXRAP19793 462 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 TNFAIP3P21580 790 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 ADRA1DP25100 572 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 HTR7P34969 479 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 PBX1P40424 430 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 FOLR3P41439 243 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 RXRGP48443 463 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 PCP4P48539 62 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 HNRNPMP52272 730 aaKnown RBP eCLIP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 PRKAA2P54646 552 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 PDE1AP54750 535 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 MPP1Q00013 466 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 TBL3Q12788 808 aaKnown RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 SF3A3Q12874 501 aaKnown RBP eCLIP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 MTAPQ13126 283 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 DNASE1L3Q13609 305 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 DCTN1Q14203 1278 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 NFIXQ14938 502 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 SF3B3Q15393 1217 aaKnown RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 BTBD16Q32M84 506 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 TREML2Q5T2D2 321 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 XP32Q5T750 250 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 FAM90A2PQ658T7 463 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 TTLL5Q6EMB2 1281 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 DGAT2L7PQ6IED9 249 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 ZNF585AQ6P3V2 769 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 DSTYKQ6XUX3 929 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 C4orf50Q6ZRC1 276 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 PIK3AP1Q6ZUJ8 805 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 FAM71DQ8N9W8 422 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 TOR1AIP2Q8NFQ8 470 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 CEP70Q8NHQ1 597 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 CXorf38Q8TB03 319 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 CSGALNACT1Q8TDX6 532 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 NOC3LQ8WTT2 800 aaKnown RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 SLC22A17Q8WUG5 538 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 RFFLQ8WZ73 363 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 FKBP10Q96AY3 582 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 LENG9Q96B70 501 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 SH3KBP1Q96B97 665 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 PIGSQ96S52 555 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 CINPQ9BW66 212 aaPredicted RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 ZNF768Q9H5H4 540 aaKnown RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 NRDE2Q9H7Z3 1164 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 KCNK9Q9NPC2 374 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 FSCN3Q9NQT6 498 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 CEP72Q9P209 647 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 TESQ9UGI8 421 aaKnown RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 FBXO2Q9UK22 296 aaPredicted RBP3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 AMFRQ9UKV5 643 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 SUFUQ9UMX1 484 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 GABRQQ9UN88 632 aa3.32□□□□□ -1.88
TRAJ40-201ENST00000390497 MBD3L5A6NJ08 208 aaPredicted RBP3.31□□□□□ -1.88
TRAJ40-201ENST00000390497 B4E171 279 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms