RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PAX1P15863 534 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 NME2P22392 152 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MST1P26927 711 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CHRNA5P30532 468 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 HNRNPH2P55795 449 aaKnown RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 EMX1Q04741 257 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TRAF3Q13114 568 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TCIRG1Q13488 830 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PTPN21Q16825 1174 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 EMC4Q5J8M3 183 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 NOL9Q5SY16 702 aaKnown RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MROH9Q5TGP6 573 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PDZRN4Q6ZMN7 1036 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 KRT28Q7Z3Y7 464 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 APLFQ8IW19 511 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PAQR4Q8N4S7 273 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF615Q8N8J6 731 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF491Q8N8L2 437 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PRPF38AQ8NAV1 312 aaKnown RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RGS22Q8NE09 1264 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 OR10H5Q8NGA6 315 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 OR56A1Q8NGH5 318 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PDCD6IPQ8WUM4 868 aaKnown RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 URB1-AS1Q96HZ7 61 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SERAC1Q96JX3 654 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FIZ1Q96SL8 496 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 EMILIN2Q9BXX0 1053 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FGFBP2Q9BYJ0 223 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF442Q9H7R0 627 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 UBTD1Q9HAC8 227 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MOV10Q9HCE1 1003 aaKnown RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TFCP2L1Q9NZI6 479 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TBX21Q9UL17 535 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZMYND8Q9ULU4 1186 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CLCA2Q9UQC9 943 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PCDHB4Q9Y5E5 795 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PCDHA13Q9Y5I0 950 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SLC12A7Q9Y666 1083 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZFP37Q9Y6Q3 630 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ARFGEF3Q5TH69 2177 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 KIAA1217Q5T5P2 1943 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ATRQ13535 2644 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ASTN1O14525 1302 aa-1.94□□□□□ -2.72
RNU6-1340P-201ENST00000384438 IGKV1D-42A0A075B6H8 117 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SAA2-SAA4A0A096LPE2 208 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 LOC101059948A0A1B0GTJ6 334 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FAM168BA1KXE4 195 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TMEM150BA6NC51 233 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PALM3A6NDB9 673 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 UPK3BL1B0FP48 263 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 UPK3BL2E5RIL1 263 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 H0YL77 283 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 H7C1Q1 480 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PSMD14O00487 310 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 NKRFO15226 690 aaKnown RBP eCLIP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PCDH7O60245 1069 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GPRIN2O60269 458 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SLCO2B1O94956 709 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FSTL3O95633 263 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 EBLN1P0CF75 366 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF286BP0CG31 522 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SRCP12931 536 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FAHP16930 419 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TYMPP19971 482 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CSTF2P33240 577 aaKnown RBP eCLIP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 G6PCP35575 357 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 IER3P46695 156 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ZNF135P52742 658 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GABREP78334 506 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TNFAIP2Q03169 654 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PTPN11Q06124 597 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 ITGA9Q13797 1035 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 HLFQ16534 295 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SBK1Q52WX2 424 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 GJC2Q5T442 439 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 NBPF12Q5TAG4 269 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FCRL6Q6DN72 434 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PRPF40BQ6NWY9 871 aaKnown RBP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 SLC25A34Q6PIV7 304 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 Q6ZRN7 208 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FCRLAQ7L513 359 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 BHLHA15Q7RTS1 189 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 P3H3Q8IVL6 736 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 RHOT2Q8IXI1 618 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 COLGALT2Q8IYK4 626 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 FAM71AQ8IYT1 594 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 Q8N1Y9 231 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 CNBD1Q8NA66 436 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 KBTBD3Q8NAB2 608 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PLPP7Q8NBV4 271 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MRAPQ8TCY5 172 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 LPIN2Q92539 896 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 NPIPB3Q92617 1050 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 MKL1Q969V6 931 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 TADA1Q96BN2 335 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PAWRQ96IZ0 340 aaKnown RBP-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 WNK4Q96J92 1243 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PPP1R9BQ96SB3 815 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 PIMREGQ9BSJ6 248 aa-1.95□□□□□ -2.72
RNU6-1340P-201ENST00000384438 C16orf70Q9BSU1 422 aa-1.95□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms