RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 SLC22A23A1A5C7 686 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CYSRT1A8MQ03 144 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RAB27BO00194 218 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 FOXN3O00409 490 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ALDH1L1O75891 902 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TUSC2O75896 110 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SYF2O95926 243 aaKnown RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CD63P08962 238 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 BRAFP15056 766 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ACVR2AP27037 513 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CPT1AP50416 773 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 JAK3P52333 1124 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SUMO3P55854 103 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SLC29A2Q14542 456 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 FAM110CQ1W6H9 321 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PRTGQ2VWP7 1150 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 EARS2Q5JPH6 523 aaKnown RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MANEAQ5SRI9 462 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 APOA5Q6Q788 366 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RFX8Q6ZV50 586 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 FAM57BQ71RH2 274 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 FAM71DQ8N9W8 422 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZCRB1Q8TBF4 217 aaKnown RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ASB5Q8WWX0 329 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SUCLG2Q96I99 432 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZNF479Q96JC4 524 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 VPS50Q96JG6 964 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZNF668Q96K58 619 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RTFDC1Q9BY42 306 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 DHX36Q9H2U1 1008 aaKnown RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SLCO5A1Q9H2Y9 848 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 AGO4Q9HCK5 861 aaKnown RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MSRB1Q9NZV6 116 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 AFF4Q9UHB7 1163 aaKnown RBP3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZNF180Q9UJW8 692 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 COG5Q9UP83 839 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SLC27A6Q9Y2P4 619 aa3.07□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TMEM272A0A1B0GTI8 110 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CAPN8A6NHC0 703 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 AQP7P3A6NL99 342 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZNF814B7Z6K7 855 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CTIFO43310 598 aaKnown RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SLC28A2O43868 658 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MARCH6O60337 910 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 NDUFB8O95169 186 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 EPN2O95208 641 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MBPP02686 304 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PLA2G2AP14555 144 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 IL1R1P14778 569 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RBL1P28749 1068 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 HOXA7P31268 230 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 GALNSP34059 522 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 IL6STP40189 918 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 EIF4A1P60842 406 aaKnown RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 WDR5P61964 334 aaKnown RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RPS16P62249 146 aaKnown RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ZXDBP98169 803 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MCL1Q07820 350 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 KCNAB1Q14722 419 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TTF1Q15361 905 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ODF3L2Q3SX64 289 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 C3orf38Q5JPI3 329 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 GRHL2Q6ISB3 625 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 Q6ZTC4 211 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 EPM2AIP1Q7L775 607 aaPredicted RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 DCP1BQ8IZD4 617 aaKnown RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 NMD3Q96D46 503 aaKnown RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PPP1R10Q96QC0 940 aaKnown RBP3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 HIST1H2AAQ96QV6 131 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SEMA5BQ9P283 1151 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 VPS51Q9UID3 782 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 MID2Q9UJV3 735 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PCDHA12Q9UN75 941 aa3.06□□□□□ -1.92
RNU6-1040P-201ENST00000383974 SPATA31A1Q5TZJ5 1347 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 A0A1W2PPC1 479 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 E2F8A0AVK6 867 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CFAP69A5D8W1 941 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 C16orf96A6NNT2 1141 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 FAM227AF5H4B4 570 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 AKAP10O43572 662 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TLX3O43711 291 aaPredicted RBP3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 NGFRP08138 427 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TMIGD3P0DMS9 266 aaPredicted RBP3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TGFB3P10600 412 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ST6GAL1P15907 406 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 TPH1P17752 444 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RPS6KB1P23443 525 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 HTR7P34969 479 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 ALDH7A1P49419 539 aaKnown RBP3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RAB27AP51159 221 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 COPAP53621 1224 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RAE1P78406 368 aaKnown RBP3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 PPATQ06203 517 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CCDC15Q0P6D6 951 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CLCA4Q14CN2 919 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CNN3Q15417 329 aaKnown RBP3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 CLEC9AQ6UXN8 241 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 RBM44Q6ZP01 1051 aaKnown RBP3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 B4GALNT4Q76KP1 1039 aa3.05□□□□□ -1.92
RNU6-1040P-201ENST00000383974 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms