RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 ZNF410Q86VK4 478 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 VPS52Q8N1B4 723 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 CCDC110Q8TBZ0 833 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 STK32AQ8WU08 396 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 SLC35F5Q8WV83 523 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 EMID1Q96A84 441 aaPredicted RBP12.37□□□□□ -0.43
TRIM23-203ENST00000381018 SRPK1Q96SB4 655 aaKnown RBP12.37□□□□□ -0.43
TRIM23-203ENST00000381018 TMEM120AQ9BXJ8 343 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 TLE6Q9H808 572 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 PLEKHA5Q9HAU0 1116 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 RNPEPL1Q9HAU8 725 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 HEY2Q9UBP5 337 aa12.37□□□□□ -0.43
TRIM23-203ENST00000381018 RPL26L1Q9UNX3 145 aaKnown RBP12.37□□□□□ -0.43
TRIM23-203ENST00000381018 SLC15A5A6NIM6 579 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 A6NJR5 290 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 DNAJC6O75061 913 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 GCATO75600 419 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 MAP3K6O95382 1288 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 NPTXRO95502 500 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 PTPN9P43378 593 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 CCNG1P51959 295 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 CDK16Q00536 496 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 DPYSL2Q16555 572 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 MAMDC4Q6UXC1 1216 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 TRIM42Q8IWZ5 723 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 MTBPQ96DY7 904 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 CDCA5Q96FF9 252 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 NUMBLQ9Y6R0 609 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 CXorf49A8MYA2 514 aaPredicted RBP12.36□□□□□ -0.43
TRIM23-203ENST00000381018 H3BRB1 525 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 CCDC22O60826 627 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 PEX11AO75192 247 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 KRT38O76015 456 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 DLDP09622 509 aaKnown RBP12.36□□□□□ -0.43
TRIM23-203ENST00000381018 TPSB2P20231 275 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 L1CAMP32004 1257 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 CCNFP41002 786 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 MAGEA3P43357 314 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 NR2C2P49116 596 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 SLC8A3P57103 927 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 ZBTB16Q05516 673 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 TPSAB1Q15661 275 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 GRIK4Q16099 956 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 FAM182AQ5T1J6 154 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 ARHGAP17Q68EM7 881 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 UNC5AQ6ZN44 842 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 UNC93AQ86WB7 457 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 LRRC52Q8N7C0 313 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 GSDMBQ8TAX9 411 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 SH3TC2Q8TF17 1288 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 FBXO41Q8TF61 875 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 SKA1Q96BD8 255 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 SNX27Q96L92 541 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 ANKRD27Q96NW4 1050 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 B3GNT5Q9BYG0 378 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 DHX35Q9H5Z1 703 aaKnown RBP12.36□□□□□ -0.43
TRIM23-203ENST00000381018 TUT1Q9H6E5 874 aaKnown RBP12.36□□□□□ -0.43
TRIM23-203ENST00000381018 KCNK13Q9HB14 408 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 MKS1Q9NXB0 559 aa12.36□□□□□ -0.43
TRIM23-203ENST00000381018 RBM47A0AV96 593 aaKnown RBP12.35□□□□□ -0.43
TRIM23-203ENST00000381018 E7ENQ6 273 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 I3L4J1 428 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 PPEF2O14830 753 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 GABBR2O75899 941 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 CALB2P22676 271 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 SERPINB3P29508 390 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 SLC26A9Q7LBE3 791 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 BEST2Q8NFU1 509 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 OR6B3Q8NGW1 331 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 PTCD3Q96EY7 689 aaKnown RBP12.35□□□□□ -0.43
TRIM23-203ENST00000381018 QKIQ96PU8 341 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRIM23-203ENST00000381018 EBNA1BP2Q99848 306 aaKnown RBP12.35□□□□□ -0.43
TRIM23-203ENST00000381018 PLAC1Q9HBJ0 212 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 XAB2Q9HCS7 855 aaKnown RBP12.35□□□□□ -0.43
TRIM23-203ENST00000381018 TUBGCP4Q9UGJ1 667 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 AP4E1Q9UPM8 1137 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 PLLPQ9Y342 182 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 NME7Q9Y5B8 376 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 MAD1L1Q9Y6D9 718 aa12.35□□□□□ -0.43
TRIM23-203ENST00000381018 FAM159BA6NKW6 160 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 A8MXQ7 604 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 RFPL1O75677 317 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 METTL18O95568 372 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 TFE3P19532 575 aaPredicted RBP12.34□□□□□ -0.43
TRIM23-203ENST00000381018 ADORA2AP29274 412 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 SCNN1AP37088 669 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 ADCYAP1R1P41586 468 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 SERPINB9P50453 376 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 CCNA1P78396 465 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 GBE1Q04446 702 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 BST2Q10589 180 aaKnown RBP12.34□□□□□ -0.43
TRIM23-203ENST00000381018 MARCH8Q5T0T0 291 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 ATG16L1Q676U5 607 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 SLC27A1Q6PCB7 646 aa12.34□□□□□ -0.43
TRIM23-203ENST00000381018 CDHR3Q6ZTQ4 885 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms